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Identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma

Little is known about the prognostic risk factors of endometrial cancer. Therefore, finding effective prognostic factors of endometrial cancer is the vital for clinical theranostic. In this study, we constructed an inflammatory-related risk assessment model based on TCGA database to predict prognosi...

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Autores principales: Chen, Linlin, Zhu, Guang, Liu, Yanbo, Shao, Yupei, Pan, Bing, Zheng, Jianhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9541080/
https://www.ncbi.nlm.nih.gov/pubmed/36207698
http://dx.doi.org/10.1186/s12863-022-01088-0
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author Chen, Linlin
Zhu, Guang
Liu, Yanbo
Shao, Yupei
Pan, Bing
Zheng, Jianhong
author_facet Chen, Linlin
Zhu, Guang
Liu, Yanbo
Shao, Yupei
Pan, Bing
Zheng, Jianhong
author_sort Chen, Linlin
collection PubMed
description Little is known about the prognostic risk factors of endometrial cancer. Therefore, finding effective prognostic factors of endometrial cancer is the vital for clinical theranostic. In this study, we constructed an inflammatory-related risk assessment model based on TCGA database to predict prognosis of endometrial cancer. We screened inflammatory genes by differential expression and prognostic correlation, and constructed a prognostic model using LASSO regression analysis. We fully utilized bioinformatics tools, including ROC curve, Kaplan–Meier analysis, univariate and multivariate Cox regression analysis and in vitro experiments to verify the accuracy of the prognostic model. Finally, we further analyzed the characteristics of tumor microenvironment and drug sensitivity of these inflammatory genes. The higher the score of the endometrial cancer risk model we constructed, the worse the prognosis, which can effectively provide decision-making help for clinical endometrial diagnosis and treatment.
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spelling pubmed-95410802022-10-08 Identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma Chen, Linlin Zhu, Guang Liu, Yanbo Shao, Yupei Pan, Bing Zheng, Jianhong BMC Genom Data Research Little is known about the prognostic risk factors of endometrial cancer. Therefore, finding effective prognostic factors of endometrial cancer is the vital for clinical theranostic. In this study, we constructed an inflammatory-related risk assessment model based on TCGA database to predict prognosis of endometrial cancer. We screened inflammatory genes by differential expression and prognostic correlation, and constructed a prognostic model using LASSO regression analysis. We fully utilized bioinformatics tools, including ROC curve, Kaplan–Meier analysis, univariate and multivariate Cox regression analysis and in vitro experiments to verify the accuracy of the prognostic model. Finally, we further analyzed the characteristics of tumor microenvironment and drug sensitivity of these inflammatory genes. The higher the score of the endometrial cancer risk model we constructed, the worse the prognosis, which can effectively provide decision-making help for clinical endometrial diagnosis and treatment. BioMed Central 2022-10-07 /pmc/articles/PMC9541080/ /pubmed/36207698 http://dx.doi.org/10.1186/s12863-022-01088-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Chen, Linlin
Zhu, Guang
Liu, Yanbo
Shao, Yupei
Pan, Bing
Zheng, Jianhong
Identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma
title Identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma
title_full Identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma
title_fullStr Identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma
title_full_unstemmed Identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma
title_short Identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma
title_sort identification of inflammatory-related gene signatures to predict prognosis of endometrial carcinoma
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9541080/
https://www.ncbi.nlm.nih.gov/pubmed/36207698
http://dx.doi.org/10.1186/s12863-022-01088-0
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