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Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid
BACKGROUND: Keloid is a pathological skin scar formation with complex and unclear molecular pathology mechanism. Novel biomarkers and associated mechanisms are needed to improve current therapies. OBJECTIVES: To identify novel biomarkers and underlying pathological mechanisms of keloids. METHODS: Si...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9541363/ https://www.ncbi.nlm.nih.gov/pubmed/35435317 http://dx.doi.org/10.1002/prca.202100127 |
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author | Liu, Jian Yang, Chunhua Zhang, Huayu Hu, Wei Bergquist, Jonas Wang, Helen Deng, Tingzhi Yang, Xueling Zhang, Chao Zhu, Yanping Chi, Xiaodong Mi, Jia Wang, Yibing |
author_facet | Liu, Jian Yang, Chunhua Zhang, Huayu Hu, Wei Bergquist, Jonas Wang, Helen Deng, Tingzhi Yang, Xueling Zhang, Chao Zhu, Yanping Chi, Xiaodong Mi, Jia Wang, Yibing |
author_sort | Liu, Jian |
collection | PubMed |
description | BACKGROUND: Keloid is a pathological skin scar formation with complex and unclear molecular pathology mechanism. Novel biomarkers and associated mechanisms are needed to improve current therapies. OBJECTIVES: To identify novel biomarkers and underlying pathological mechanisms of keloids. METHODS: Six pairs of keloid scar tissues and corresponding normal skin tissues were quantitatively analyzed by a high‐resolution label‐free mass spectrometry‐based proteomics approach. Differential protein expression data was further analyzed by a comprehensive bioinformatics approach to identify novel biomarkers and mechanistic pathways for keloid formation. Candidate biomarkers were validated experimentally. RESULTS: In total, 1359 proteins were identified by proteomic analysis. Of these, 206 proteins exhibited a significant difference in expression between keloid scar and normal skin tissues. RCN3 and CALU were significantly upregulated in keloids. RCN1 and PDGFRL were uniquely expressed in keloids. Pathway analysis suggested that the XBP1‐mediated unfolded protein response (UPR) pathway was involved in keloid formation. Moreover, a PDGFRL centric gene coexpression network was constructed to illustrate its function in skin. CONCLUSIONS AND CLINICAL RELEVANCE: Our study proposed four novel biomarkers and highlighted the role of XBP1‐mediated UPR pathway in the pathology of keloids. It provided novel biological insights that contribute to develop novel therapeutic strategies for keloids. |
format | Online Article Text |
id | pubmed-9541363 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95413632022-10-14 Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid Liu, Jian Yang, Chunhua Zhang, Huayu Hu, Wei Bergquist, Jonas Wang, Helen Deng, Tingzhi Yang, Xueling Zhang, Chao Zhu, Yanping Chi, Xiaodong Mi, Jia Wang, Yibing Proteomics Clin Appl Research Articles BACKGROUND: Keloid is a pathological skin scar formation with complex and unclear molecular pathology mechanism. Novel biomarkers and associated mechanisms are needed to improve current therapies. OBJECTIVES: To identify novel biomarkers and underlying pathological mechanisms of keloids. METHODS: Six pairs of keloid scar tissues and corresponding normal skin tissues were quantitatively analyzed by a high‐resolution label‐free mass spectrometry‐based proteomics approach. Differential protein expression data was further analyzed by a comprehensive bioinformatics approach to identify novel biomarkers and mechanistic pathways for keloid formation. Candidate biomarkers were validated experimentally. RESULTS: In total, 1359 proteins were identified by proteomic analysis. Of these, 206 proteins exhibited a significant difference in expression between keloid scar and normal skin tissues. RCN3 and CALU were significantly upregulated in keloids. RCN1 and PDGFRL were uniquely expressed in keloids. Pathway analysis suggested that the XBP1‐mediated unfolded protein response (UPR) pathway was involved in keloid formation. Moreover, a PDGFRL centric gene coexpression network was constructed to illustrate its function in skin. CONCLUSIONS AND CLINICAL RELEVANCE: Our study proposed four novel biomarkers and highlighted the role of XBP1‐mediated UPR pathway in the pathology of keloids. It provided novel biological insights that contribute to develop novel therapeutic strategies for keloids. John Wiley and Sons Inc. 2022-04-26 2022-07 /pmc/articles/PMC9541363/ /pubmed/35435317 http://dx.doi.org/10.1002/prca.202100127 Text en © 2022 The Authors. Proteomics – Clinical Applications published by Wiley‐VCH GmbH. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Liu, Jian Yang, Chunhua Zhang, Huayu Hu, Wei Bergquist, Jonas Wang, Helen Deng, Tingzhi Yang, Xueling Zhang, Chao Zhu, Yanping Chi, Xiaodong Mi, Jia Wang, Yibing Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid |
title | Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid |
title_full | Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid |
title_fullStr | Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid |
title_full_unstemmed | Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid |
title_short | Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid |
title_sort | quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9541363/ https://www.ncbi.nlm.nih.gov/pubmed/35435317 http://dx.doi.org/10.1002/prca.202100127 |
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