Cargando…
Neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited Bryophyllum PCSCs guided by salicylic acid
Novel approaches to the characterization of medicinal plants as biofactories have lately increased in the field of biotechnology. In this work, a multifaceted approach based on plant tissue culture, metabolomics, and machine learning was applied to decipher and further characterize the biosynthesis...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9541431/ https://www.ncbi.nlm.nih.gov/pubmed/36212372 http://dx.doi.org/10.3389/fpls.2022.991557 |
_version_ | 1784803922871844864 |
---|---|
author | García-Pérez, Pascual Lozano-Milo, Eva Zhang, Leilei Miras-Moreno, Begoña Landin, Mariana Lucini, Luigi Gallego, Pedro P. |
author_facet | García-Pérez, Pascual Lozano-Milo, Eva Zhang, Leilei Miras-Moreno, Begoña Landin, Mariana Lucini, Luigi Gallego, Pedro P. |
author_sort | García-Pérez, Pascual |
collection | PubMed |
description | Novel approaches to the characterization of medicinal plants as biofactories have lately increased in the field of biotechnology. In this work, a multifaceted approach based on plant tissue culture, metabolomics, and machine learning was applied to decipher and further characterize the biosynthesis of phenolic compounds by eliciting cell suspension cultures from medicinal plants belonging to the Bryophyllum subgenus. The application of untargeted metabolomics provided a total of 460 phenolic compounds. The biosynthesis of 164 of them was significantly modulated by elicitation. The application of neurofuzzy logic as a machine learning tool allowed for deciphering the critical factors involved in the response to elicitation, predicting their influence and interactions on plant cell growth and the biosynthesis of several polyphenols subfamilies. The results indicate that salicylic acid plays a definitive genotype-dependent role in the elicitation of Bryophyllum cell cultures, while methyl jasmonate was revealed as a secondary factor. The knowledge provided by this approach opens a wide perspective on the research of medicinal plants and facilitates their biotechnological exploitation as biofactories in the food, cosmetic and pharmaceutical fields. |
format | Online Article Text |
id | pubmed-9541431 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95414312022-10-08 Neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited Bryophyllum PCSCs guided by salicylic acid García-Pérez, Pascual Lozano-Milo, Eva Zhang, Leilei Miras-Moreno, Begoña Landin, Mariana Lucini, Luigi Gallego, Pedro P. Front Plant Sci Plant Science Novel approaches to the characterization of medicinal plants as biofactories have lately increased in the field of biotechnology. In this work, a multifaceted approach based on plant tissue culture, metabolomics, and machine learning was applied to decipher and further characterize the biosynthesis of phenolic compounds by eliciting cell suspension cultures from medicinal plants belonging to the Bryophyllum subgenus. The application of untargeted metabolomics provided a total of 460 phenolic compounds. The biosynthesis of 164 of them was significantly modulated by elicitation. The application of neurofuzzy logic as a machine learning tool allowed for deciphering the critical factors involved in the response to elicitation, predicting their influence and interactions on plant cell growth and the biosynthesis of several polyphenols subfamilies. The results indicate that salicylic acid plays a definitive genotype-dependent role in the elicitation of Bryophyllum cell cultures, while methyl jasmonate was revealed as a secondary factor. The knowledge provided by this approach opens a wide perspective on the research of medicinal plants and facilitates their biotechnological exploitation as biofactories in the food, cosmetic and pharmaceutical fields. Frontiers Media S.A. 2022-09-23 /pmc/articles/PMC9541431/ /pubmed/36212372 http://dx.doi.org/10.3389/fpls.2022.991557 Text en Copyright © 2022 García-Pérez, Lozano-Milo, Zhang, Miras-Moreno, Landin, Lucini and Gallego https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science García-Pérez, Pascual Lozano-Milo, Eva Zhang, Leilei Miras-Moreno, Begoña Landin, Mariana Lucini, Luigi Gallego, Pedro P. Neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited Bryophyllum PCSCs guided by salicylic acid |
title | Neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited Bryophyllum PCSCs guided by salicylic acid |
title_full | Neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited Bryophyllum PCSCs guided by salicylic acid |
title_fullStr | Neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited Bryophyllum PCSCs guided by salicylic acid |
title_full_unstemmed | Neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited Bryophyllum PCSCs guided by salicylic acid |
title_short | Neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited Bryophyllum PCSCs guided by salicylic acid |
title_sort | neurofuzzy logic predicts a fine-tuning metabolic reprogramming on elicited bryophyllum pcscs guided by salicylic acid |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9541431/ https://www.ncbi.nlm.nih.gov/pubmed/36212372 http://dx.doi.org/10.3389/fpls.2022.991557 |
work_keys_str_mv | AT garciaperezpascual neurofuzzylogicpredictsafinetuningmetabolicreprogrammingonelicitedbryophyllumpcscsguidedbysalicylicacid AT lozanomiloeva neurofuzzylogicpredictsafinetuningmetabolicreprogrammingonelicitedbryophyllumpcscsguidedbysalicylicacid AT zhangleilei neurofuzzylogicpredictsafinetuningmetabolicreprogrammingonelicitedbryophyllumpcscsguidedbysalicylicacid AT mirasmorenobegona neurofuzzylogicpredictsafinetuningmetabolicreprogrammingonelicitedbryophyllumpcscsguidedbysalicylicacid AT landinmariana neurofuzzylogicpredictsafinetuningmetabolicreprogrammingonelicitedbryophyllumpcscsguidedbysalicylicacid AT luciniluigi neurofuzzylogicpredictsafinetuningmetabolicreprogrammingonelicitedbryophyllumpcscsguidedbysalicylicacid AT gallegopedrop neurofuzzylogicpredictsafinetuningmetabolicreprogrammingonelicitedbryophyllumpcscsguidedbysalicylicacid |