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Anatomical Partition‐Based Deep Learning: An Automatic Nasopharyngeal MRI Recognition Scheme

BACKGROUND: Training deep learning (DL) models to automatically recognize diseases in nasopharyngeal MRI is a challenging task, and optimizing the performance of DL models is difficult. PURPOSE: To develop a method of training anatomical partition‐based DL model which integrates knowledge of clinica...

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Autores principales: Li, Song, Hua, Hong‐Li, Li, Fen, Kong, Yong‐Gang, Zhu, Zhi‐Ling, Li, Sheng‐Lan, Chen, Xi‐Xiang, Deng, Yu‐Qin, Tao, Ze‐Zhang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9541866/
https://www.ncbi.nlm.nih.gov/pubmed/35157782
http://dx.doi.org/10.1002/jmri.28112
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author Li, Song
Hua, Hong‐Li
Li, Fen
Kong, Yong‐Gang
Zhu, Zhi‐Ling
Li, Sheng‐Lan
Chen, Xi‐Xiang
Deng, Yu‐Qin
Tao, Ze‐Zhang
author_facet Li, Song
Hua, Hong‐Li
Li, Fen
Kong, Yong‐Gang
Zhu, Zhi‐Ling
Li, Sheng‐Lan
Chen, Xi‐Xiang
Deng, Yu‐Qin
Tao, Ze‐Zhang
author_sort Li, Song
collection PubMed
description BACKGROUND: Training deep learning (DL) models to automatically recognize diseases in nasopharyngeal MRI is a challenging task, and optimizing the performance of DL models is difficult. PURPOSE: To develop a method of training anatomical partition‐based DL model which integrates knowledge of clinical anatomical regions in otorhinolaryngology to automatically recognize diseases in nasopharyngeal MRI. STUDY TYPE: Single‐center retrospective study. POPULATION: A total of 2485 patients with nasopharyngeal diseases (age range 14–82 years, female, 779[31.3%]) and 600 people with normal nasopharynx (age range 18–78 years, female, 281[46.8%]) were included. SEQUENCE: 3.0 T; T2WI fast spin‐echo sequence. ASSESSMENT: Full images (512 × 512) of 3085 patients constituted 100% of the dataset, 50% and 25% of which were randomly retained as two new datasets. Two new series of images (seg112 image [112 × 112] and seg224 image [224 × 224]) were automatically generated by a segmentation model. Four pretrained neural networks for nasopharyngeal diseases classification were trained under the nine datasets (full image, seg112 image, and seg224 image, each with 100% dataset, 50% dataset, and 25% dataset). STATISTICAL TESTS: The receiver operating characteristic curve was used to evaluate the performance of the models. Analysis of variance was used to compare the performance of the models built with different datasets. Statistical significance was set at P < 0.05. RESULTS: When the 100% dataset was used for training, the performances of the models trained with the seg112 images (average area under the curve [aAUC] 0.949 ± 0.052), seg224 images (aAUC 0.948 ± 0.053), and full images (aAUC 0.935 ± 0.053) were similar (P = 0.611). When the 25% dataset was used for training, the mean aAUC of the models that were trained with seg112 images (0.823 ± 0.116) and seg224 images (0.765 ± 0.155) was significantly higher than the models that were trained with full images (0.640 ± 0.154). DATA CONCLUSION: The proposed method can potentially improve the performance of the DL model for automatic recognition of diseases in nasopharyngeal MRI. LEVEL OF EVIDENCE: 4 TECHNICAL EFFICACY STAGE: 1
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spelling pubmed-95418662022-10-14 Anatomical Partition‐Based Deep Learning: An Automatic Nasopharyngeal MRI Recognition Scheme Li, Song Hua, Hong‐Li Li, Fen Kong, Yong‐Gang Zhu, Zhi‐Ling Li, Sheng‐Lan Chen, Xi‐Xiang Deng, Yu‐Qin Tao, Ze‐Zhang J Magn Reson Imaging Research Articles BACKGROUND: Training deep learning (DL) models to automatically recognize diseases in nasopharyngeal MRI is a challenging task, and optimizing the performance of DL models is difficult. PURPOSE: To develop a method of training anatomical partition‐based DL model which integrates knowledge of clinical anatomical regions in otorhinolaryngology to automatically recognize diseases in nasopharyngeal MRI. STUDY TYPE: Single‐center retrospective study. POPULATION: A total of 2485 patients with nasopharyngeal diseases (age range 14–82 years, female, 779[31.3%]) and 600 people with normal nasopharynx (age range 18–78 years, female, 281[46.8%]) were included. SEQUENCE: 3.0 T; T2WI fast spin‐echo sequence. ASSESSMENT: Full images (512 × 512) of 3085 patients constituted 100% of the dataset, 50% and 25% of which were randomly retained as two new datasets. Two new series of images (seg112 image [112 × 112] and seg224 image [224 × 224]) were automatically generated by a segmentation model. Four pretrained neural networks for nasopharyngeal diseases classification were trained under the nine datasets (full image, seg112 image, and seg224 image, each with 100% dataset, 50% dataset, and 25% dataset). STATISTICAL TESTS: The receiver operating characteristic curve was used to evaluate the performance of the models. Analysis of variance was used to compare the performance of the models built with different datasets. Statistical significance was set at P < 0.05. RESULTS: When the 100% dataset was used for training, the performances of the models trained with the seg112 images (average area under the curve [aAUC] 0.949 ± 0.052), seg224 images (aAUC 0.948 ± 0.053), and full images (aAUC 0.935 ± 0.053) were similar (P = 0.611). When the 25% dataset was used for training, the mean aAUC of the models that were trained with seg112 images (0.823 ± 0.116) and seg224 images (0.765 ± 0.155) was significantly higher than the models that were trained with full images (0.640 ± 0.154). DATA CONCLUSION: The proposed method can potentially improve the performance of the DL model for automatic recognition of diseases in nasopharyngeal MRI. LEVEL OF EVIDENCE: 4 TECHNICAL EFFICACY STAGE: 1 John Wiley & Sons, Inc. 2022-02-14 2022-10 /pmc/articles/PMC9541866/ /pubmed/35157782 http://dx.doi.org/10.1002/jmri.28112 Text en © 2022 The Authors. Journal of Magnetic Resonance Imaging published by Wiley Periodicals LLC on behalf of International Society for Magnetic Resonance in Medicine. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Li, Song
Hua, Hong‐Li
Li, Fen
Kong, Yong‐Gang
Zhu, Zhi‐Ling
Li, Sheng‐Lan
Chen, Xi‐Xiang
Deng, Yu‐Qin
Tao, Ze‐Zhang
Anatomical Partition‐Based Deep Learning: An Automatic Nasopharyngeal MRI Recognition Scheme
title Anatomical Partition‐Based Deep Learning: An Automatic Nasopharyngeal MRI Recognition Scheme
title_full Anatomical Partition‐Based Deep Learning: An Automatic Nasopharyngeal MRI Recognition Scheme
title_fullStr Anatomical Partition‐Based Deep Learning: An Automatic Nasopharyngeal MRI Recognition Scheme
title_full_unstemmed Anatomical Partition‐Based Deep Learning: An Automatic Nasopharyngeal MRI Recognition Scheme
title_short Anatomical Partition‐Based Deep Learning: An Automatic Nasopharyngeal MRI Recognition Scheme
title_sort anatomical partition‐based deep learning: an automatic nasopharyngeal mri recognition scheme
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9541866/
https://www.ncbi.nlm.nih.gov/pubmed/35157782
http://dx.doi.org/10.1002/jmri.28112
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