Cargando…

Network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in MFSD3 and MRPL43 associated with dementia with Lewy bodies

Dementia with Lewy bodies (DLB) is the second most common form of neurodegenerative dementia in elderly people, following Alzheimer's disease. Only three genes, SNCA (α‐synuclein), APOE (apolipoprotein E), and GBA (glucosylceramidase), have been convincingly demonstrated to be associated with D...

Descripción completa

Detalles Bibliográficos
Autores principales: Shigemizu, Daichi, Asanomi, Yuya, Akiyama, Shintaro, Higaki, Sayuri, Sakurai, Takashi, Ito, Kengo, Niida, Shumpei, Ozaki, Kouichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9543256/
https://www.ncbi.nlm.nih.gov/pubmed/35765761
http://dx.doi.org/10.1002/ajmg.b.32908
_version_ 1784804333453312000
author Shigemizu, Daichi
Asanomi, Yuya
Akiyama, Shintaro
Higaki, Sayuri
Sakurai, Takashi
Ito, Kengo
Niida, Shumpei
Ozaki, Kouichi
author_facet Shigemizu, Daichi
Asanomi, Yuya
Akiyama, Shintaro
Higaki, Sayuri
Sakurai, Takashi
Ito, Kengo
Niida, Shumpei
Ozaki, Kouichi
author_sort Shigemizu, Daichi
collection PubMed
description Dementia with Lewy bodies (DLB) is the second most common form of neurodegenerative dementia in elderly people, following Alzheimer's disease. Only three genes, SNCA (α‐synuclein), APOE (apolipoprotein E), and GBA (glucosylceramidase), have been convincingly demonstrated to be associated with DLB. Here, we applied whole‐genome sequencing to blood samples from 61 DLB patients and 45 cognitively normal controls. We used accumulation of candidate mutations to detect novel DLB‐associated genes. Subsequent single nucleotide polymorphism (SNP) genotyping and association studies in a large number of samples from Japanese individuals revealed novel heterozygous variants in MFSD3 (rs143475431, c.888T>A:p.C296*; n = 5,421, p = 0.00063) and MRPL43 (chr10:102746730, c.241A>C:p.N81H; n = 4,782, p = 0.0029). We further found that the MFSD3 variant increased plasma levels of butyrylcholinesterase (n = 1,206, p = 0.029). We believe that our findings will contribute to the understanding of DLB and provide insight into its pathogenic mechanism for future studies.
format Online
Article
Text
id pubmed-9543256
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher John Wiley & Sons, Inc.
record_format MEDLINE/PubMed
spelling pubmed-95432562022-10-14 Network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in MFSD3 and MRPL43 associated with dementia with Lewy bodies Shigemizu, Daichi Asanomi, Yuya Akiyama, Shintaro Higaki, Sayuri Sakurai, Takashi Ito, Kengo Niida, Shumpei Ozaki, Kouichi Am J Med Genet B Neuropsychiatr Genet Original Articles Dementia with Lewy bodies (DLB) is the second most common form of neurodegenerative dementia in elderly people, following Alzheimer's disease. Only three genes, SNCA (α‐synuclein), APOE (apolipoprotein E), and GBA (glucosylceramidase), have been convincingly demonstrated to be associated with DLB. Here, we applied whole‐genome sequencing to blood samples from 61 DLB patients and 45 cognitively normal controls. We used accumulation of candidate mutations to detect novel DLB‐associated genes. Subsequent single nucleotide polymorphism (SNP) genotyping and association studies in a large number of samples from Japanese individuals revealed novel heterozygous variants in MFSD3 (rs143475431, c.888T>A:p.C296*; n = 5,421, p = 0.00063) and MRPL43 (chr10:102746730, c.241A>C:p.N81H; n = 4,782, p = 0.0029). We further found that the MFSD3 variant increased plasma levels of butyrylcholinesterase (n = 1,206, p = 0.029). We believe that our findings will contribute to the understanding of DLB and provide insight into its pathogenic mechanism for future studies. John Wiley & Sons, Inc. 2022-06-28 2022-07 /pmc/articles/PMC9543256/ /pubmed/35765761 http://dx.doi.org/10.1002/ajmg.b.32908 Text en © 2022 The Authors. American Journal of Medical Genetics Part B: Neuropsychiatric Genetics published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Original Articles
Shigemizu, Daichi
Asanomi, Yuya
Akiyama, Shintaro
Higaki, Sayuri
Sakurai, Takashi
Ito, Kengo
Niida, Shumpei
Ozaki, Kouichi
Network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in MFSD3 and MRPL43 associated with dementia with Lewy bodies
title Network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in MFSD3 and MRPL43 associated with dementia with Lewy bodies
title_full Network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in MFSD3 and MRPL43 associated with dementia with Lewy bodies
title_fullStr Network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in MFSD3 and MRPL43 associated with dementia with Lewy bodies
title_full_unstemmed Network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in MFSD3 and MRPL43 associated with dementia with Lewy bodies
title_short Network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in MFSD3 and MRPL43 associated with dementia with Lewy bodies
title_sort network‐based meta‐analysis and the candidate gene association studies reveal novel ethnicity‐specific variants in mfsd3 and mrpl43 associated with dementia with lewy bodies
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9543256/
https://www.ncbi.nlm.nih.gov/pubmed/35765761
http://dx.doi.org/10.1002/ajmg.b.32908
work_keys_str_mv AT shigemizudaichi networkbasedmetaanalysisandthecandidategeneassociationstudiesrevealnovelethnicityspecificvariantsinmfsd3andmrpl43associatedwithdementiawithlewybodies
AT asanomiyuya networkbasedmetaanalysisandthecandidategeneassociationstudiesrevealnovelethnicityspecificvariantsinmfsd3andmrpl43associatedwithdementiawithlewybodies
AT akiyamashintaro networkbasedmetaanalysisandthecandidategeneassociationstudiesrevealnovelethnicityspecificvariantsinmfsd3andmrpl43associatedwithdementiawithlewybodies
AT higakisayuri networkbasedmetaanalysisandthecandidategeneassociationstudiesrevealnovelethnicityspecificvariantsinmfsd3andmrpl43associatedwithdementiawithlewybodies
AT sakuraitakashi networkbasedmetaanalysisandthecandidategeneassociationstudiesrevealnovelethnicityspecificvariantsinmfsd3andmrpl43associatedwithdementiawithlewybodies
AT itokengo networkbasedmetaanalysisandthecandidategeneassociationstudiesrevealnovelethnicityspecificvariantsinmfsd3andmrpl43associatedwithdementiawithlewybodies
AT niidashumpei networkbasedmetaanalysisandthecandidategeneassociationstudiesrevealnovelethnicityspecificvariantsinmfsd3andmrpl43associatedwithdementiawithlewybodies
AT ozakikouichi networkbasedmetaanalysisandthecandidategeneassociationstudiesrevealnovelethnicityspecificvariantsinmfsd3andmrpl43associatedwithdementiawithlewybodies