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Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis

Diagnostic tests play an important role in medical research and clinical practice. The ultimate goal of a diagnostic test is to distinguish between diseased and nondiseased individuals and before a test is routinely used in practice, it is a pivotal requirement that its ability to discriminate betwe...

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Detalles Bibliográficos
Autores principales: Inácio, Vanda, Garrido Guillén, Javier E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9543308/
https://www.ncbi.nlm.nih.gov/pubmed/35760708
http://dx.doi.org/10.1002/sim.9480
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author Inácio, Vanda
Garrido Guillén, Javier E.
author_facet Inácio, Vanda
Garrido Guillén, Javier E.
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description Diagnostic tests play an important role in medical research and clinical practice. The ultimate goal of a diagnostic test is to distinguish between diseased and nondiseased individuals and before a test is routinely used in practice, it is a pivotal requirement that its ability to discriminate between these two states is thoroughly assessed. The overlap coefficient, which is defined as the proportion of overlap area between two probability density functions, has gained popularity as a summary measure of diagnostic accuracy. We propose two Bayesian nonparametric estimators, based on Dirichlet process mixtures, for estimating the overlap coefficient. We further introduce the covariate‐specific overlap coefficient and develop a Bayesian nonparametric approach based on Dirichlet process mixtures of additive normal models for estimating it. A simulation study is conducted to assess the empirical performance of our proposed estimators. Two illustrations are provided: one concerned with the search for biomarkers of ovarian cancer and another one aimed to assess the age‐specific accuracy of glucose as a biomarker of diabetes.
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spelling pubmed-95433082022-10-14 Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis Inácio, Vanda Garrido Guillén, Javier E. Stat Med Research Articles Diagnostic tests play an important role in medical research and clinical practice. The ultimate goal of a diagnostic test is to distinguish between diseased and nondiseased individuals and before a test is routinely used in practice, it is a pivotal requirement that its ability to discriminate between these two states is thoroughly assessed. The overlap coefficient, which is defined as the proportion of overlap area between two probability density functions, has gained popularity as a summary measure of diagnostic accuracy. We propose two Bayesian nonparametric estimators, based on Dirichlet process mixtures, for estimating the overlap coefficient. We further introduce the covariate‐specific overlap coefficient and develop a Bayesian nonparametric approach based on Dirichlet process mixtures of additive normal models for estimating it. A simulation study is conducted to assess the empirical performance of our proposed estimators. Two illustrations are provided: one concerned with the search for biomarkers of ovarian cancer and another one aimed to assess the age‐specific accuracy of glucose as a biomarker of diabetes. John Wiley and Sons Inc. 2022-06-27 2022-09-10 /pmc/articles/PMC9543308/ /pubmed/35760708 http://dx.doi.org/10.1002/sim.9480 Text en © 2022 The Authors. Statistics in Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Articles
Inácio, Vanda
Garrido Guillén, Javier E.
Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis
title Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis
title_full Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis
title_fullStr Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis
title_full_unstemmed Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis
title_short Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis
title_sort bayesian nonparametric inference for the overlap coefficient: with an application to disease diagnosis
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9543308/
https://www.ncbi.nlm.nih.gov/pubmed/35760708
http://dx.doi.org/10.1002/sim.9480
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