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Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis
Diagnostic tests play an important role in medical research and clinical practice. The ultimate goal of a diagnostic test is to distinguish between diseased and nondiseased individuals and before a test is routinely used in practice, it is a pivotal requirement that its ability to discriminate betwe...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9543308/ https://www.ncbi.nlm.nih.gov/pubmed/35760708 http://dx.doi.org/10.1002/sim.9480 |
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author | Inácio, Vanda Garrido Guillén, Javier E. |
author_facet | Inácio, Vanda Garrido Guillén, Javier E. |
author_sort | Inácio, Vanda |
collection | PubMed |
description | Diagnostic tests play an important role in medical research and clinical practice. The ultimate goal of a diagnostic test is to distinguish between diseased and nondiseased individuals and before a test is routinely used in practice, it is a pivotal requirement that its ability to discriminate between these two states is thoroughly assessed. The overlap coefficient, which is defined as the proportion of overlap area between two probability density functions, has gained popularity as a summary measure of diagnostic accuracy. We propose two Bayesian nonparametric estimators, based on Dirichlet process mixtures, for estimating the overlap coefficient. We further introduce the covariate‐specific overlap coefficient and develop a Bayesian nonparametric approach based on Dirichlet process mixtures of additive normal models for estimating it. A simulation study is conducted to assess the empirical performance of our proposed estimators. Two illustrations are provided: one concerned with the search for biomarkers of ovarian cancer and another one aimed to assess the age‐specific accuracy of glucose as a biomarker of diabetes. |
format | Online Article Text |
id | pubmed-9543308 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95433082022-10-14 Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis Inácio, Vanda Garrido Guillén, Javier E. Stat Med Research Articles Diagnostic tests play an important role in medical research and clinical practice. The ultimate goal of a diagnostic test is to distinguish between diseased and nondiseased individuals and before a test is routinely used in practice, it is a pivotal requirement that its ability to discriminate between these two states is thoroughly assessed. The overlap coefficient, which is defined as the proportion of overlap area between two probability density functions, has gained popularity as a summary measure of diagnostic accuracy. We propose two Bayesian nonparametric estimators, based on Dirichlet process mixtures, for estimating the overlap coefficient. We further introduce the covariate‐specific overlap coefficient and develop a Bayesian nonparametric approach based on Dirichlet process mixtures of additive normal models for estimating it. A simulation study is conducted to assess the empirical performance of our proposed estimators. Two illustrations are provided: one concerned with the search for biomarkers of ovarian cancer and another one aimed to assess the age‐specific accuracy of glucose as a biomarker of diabetes. John Wiley and Sons Inc. 2022-06-27 2022-09-10 /pmc/articles/PMC9543308/ /pubmed/35760708 http://dx.doi.org/10.1002/sim.9480 Text en © 2022 The Authors. Statistics in Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Research Articles Inácio, Vanda Garrido Guillén, Javier E. Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis |
title | Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis |
title_full | Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis |
title_fullStr | Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis |
title_full_unstemmed | Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis |
title_short | Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis |
title_sort | bayesian nonparametric inference for the overlap coefficient: with an application to disease diagnosis |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9543308/ https://www.ncbi.nlm.nih.gov/pubmed/35760708 http://dx.doi.org/10.1002/sim.9480 |
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