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The genomic landscape of blood groups in Indigenous Australians in remote communities
BACKGROUND: Red blood cell (RBC) membrane‐associated blood group systems are clinically significant. Alloimmunisation is a persistent risk associated with blood transfusion owing to the antigen polymorphisms among these RBC‐associated blood groups. Next‐generation sequencing (NGS) offers an opportun...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9544628/ https://www.ncbi.nlm.nih.gov/pubmed/35403234 http://dx.doi.org/10.1111/trf.16873 |
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author | Jadhao, Sudhir Hoy, Wendy Lee, Simon Patel, Hardip R. McMorran, Brendan J. Flower, Robert L. Nagaraj, Shivashankar H. |
author_facet | Jadhao, Sudhir Hoy, Wendy Lee, Simon Patel, Hardip R. McMorran, Brendan J. Flower, Robert L. Nagaraj, Shivashankar H. |
author_sort | Jadhao, Sudhir |
collection | PubMed |
description | BACKGROUND: Red blood cell (RBC) membrane‐associated blood group systems are clinically significant. Alloimmunisation is a persistent risk associated with blood transfusion owing to the antigen polymorphisms among these RBC‐associated blood groups. Next‐generation sequencing (NGS) offers an opportunity to characterize the blood group variant profile of a given individual. Australia comprises a large multiethnic population where most blood donors are Caucasian and blood group variants remain poorly studied among Indigenous Australians. In this study, we focused on the Tiwi Islanders, who have lived in relative isolation for thousands of years. METHODS AND MATERIALS: We predicted the blood group phenotype profiles in the Tiwi (457) and 1000 Genomes Phase 3 (1KGP3‐2504) cohort individuals using RBCeq (https://www.rbceq.org/). The predicted phenotype prevalence was compared with the previous literature report. RESULTS: We report, for the first time, comprehensive blood group profiles corresponding to the 35 known blood group systems among the Indigenous Tiwi islander population and identify possible novel antigen variants therein. Our results demonstrate that the genetic makeup of the Tiwi participants is distinct from that of other populations, with a low prevalence of LU (Au[a−b+]) and ABO (A2) and D+C+c+E+e− phenotype, an absence of Diego blood group variants, and a unique RHD (DIII type4) variant. CONCLUSION: Our results may contribute to the development of a database of predicted phenotype donors among the Tiwi population and aid in improving transfusion safety for the ~2800 Tiwi people and the ~800,000 other Indigenous Australians throughout the nation. |
format | Online Article Text |
id | pubmed-9544628 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95446282022-10-14 The genomic landscape of blood groups in Indigenous Australians in remote communities Jadhao, Sudhir Hoy, Wendy Lee, Simon Patel, Hardip R. McMorran, Brendan J. Flower, Robert L. Nagaraj, Shivashankar H. Transfusion Blood Group Genomics BACKGROUND: Red blood cell (RBC) membrane‐associated blood group systems are clinically significant. Alloimmunisation is a persistent risk associated with blood transfusion owing to the antigen polymorphisms among these RBC‐associated blood groups. Next‐generation sequencing (NGS) offers an opportunity to characterize the blood group variant profile of a given individual. Australia comprises a large multiethnic population where most blood donors are Caucasian and blood group variants remain poorly studied among Indigenous Australians. In this study, we focused on the Tiwi Islanders, who have lived in relative isolation for thousands of years. METHODS AND MATERIALS: We predicted the blood group phenotype profiles in the Tiwi (457) and 1000 Genomes Phase 3 (1KGP3‐2504) cohort individuals using RBCeq (https://www.rbceq.org/). The predicted phenotype prevalence was compared with the previous literature report. RESULTS: We report, for the first time, comprehensive blood group profiles corresponding to the 35 known blood group systems among the Indigenous Tiwi islander population and identify possible novel antigen variants therein. Our results demonstrate that the genetic makeup of the Tiwi participants is distinct from that of other populations, with a low prevalence of LU (Au[a−b+]) and ABO (A2) and D+C+c+E+e− phenotype, an absence of Diego blood group variants, and a unique RHD (DIII type4) variant. CONCLUSION: Our results may contribute to the development of a database of predicted phenotype donors among the Tiwi population and aid in improving transfusion safety for the ~2800 Tiwi people and the ~800,000 other Indigenous Australians throughout the nation. John Wiley & Sons, Inc. 2022-04-11 2022-05 /pmc/articles/PMC9544628/ /pubmed/35403234 http://dx.doi.org/10.1111/trf.16873 Text en © 2022 The Authors. Transfusion published by Wiley Periodicals LLC on behalf of AABB. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Blood Group Genomics Jadhao, Sudhir Hoy, Wendy Lee, Simon Patel, Hardip R. McMorran, Brendan J. Flower, Robert L. Nagaraj, Shivashankar H. The genomic landscape of blood groups in Indigenous Australians in remote communities |
title | The genomic landscape of blood groups in Indigenous Australians in remote communities |
title_full | The genomic landscape of blood groups in Indigenous Australians in remote communities |
title_fullStr | The genomic landscape of blood groups in Indigenous Australians in remote communities |
title_full_unstemmed | The genomic landscape of blood groups in Indigenous Australians in remote communities |
title_short | The genomic landscape of blood groups in Indigenous Australians in remote communities |
title_sort | genomic landscape of blood groups in indigenous australians in remote communities |
topic | Blood Group Genomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9544628/ https://www.ncbi.nlm.nih.gov/pubmed/35403234 http://dx.doi.org/10.1111/trf.16873 |
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