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Estimating survival parameters under conditionally independent left truncation
Databases derived from electronic health records (EHRs) are commonly subject to left truncation, a type of selection bias that occurs when patients need to survive long enough to satisfy certain entry criteria. Standard methods to adjust for left truncation bias rely on an assumption of marginal ind...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9545094/ https://www.ncbi.nlm.nih.gov/pubmed/35262259 http://dx.doi.org/10.1002/pst.2202 |
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author | Sondhi, Arjun |
author_facet | Sondhi, Arjun |
author_sort | Sondhi, Arjun |
collection | PubMed |
description | Databases derived from electronic health records (EHRs) are commonly subject to left truncation, a type of selection bias that occurs when patients need to survive long enough to satisfy certain entry criteria. Standard methods to adjust for left truncation bias rely on an assumption of marginal independence between entry and survival times, which may not always be satisfied in practice. In this work, we examine how a weaker assumption of conditional independence can result in unbiased estimation of common statistical parameters. In particular, we show the estimability of conditional parameters in a truncated dataset, and of marginal parameters that leverage reference data containing non‐truncated data on confounders. The latter is complementary to observational causal inference methodology applied to real‐world external comparators, which is a common use case for real‐world databases. We implement our proposed methods in simulation studies, demonstrating unbiased estimation and valid statistical inference. We also illustrate estimation of a survival distribution under conditionally independent left truncation in a real‐world clinico‐genomic database. |
format | Online Article Text |
id | pubmed-9545094 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95450942022-10-14 Estimating survival parameters under conditionally independent left truncation Sondhi, Arjun Pharm Stat Main Papers Databases derived from electronic health records (EHRs) are commonly subject to left truncation, a type of selection bias that occurs when patients need to survive long enough to satisfy certain entry criteria. Standard methods to adjust for left truncation bias rely on an assumption of marginal independence between entry and survival times, which may not always be satisfied in practice. In this work, we examine how a weaker assumption of conditional independence can result in unbiased estimation of common statistical parameters. In particular, we show the estimability of conditional parameters in a truncated dataset, and of marginal parameters that leverage reference data containing non‐truncated data on confounders. The latter is complementary to observational causal inference methodology applied to real‐world external comparators, which is a common use case for real‐world databases. We implement our proposed methods in simulation studies, demonstrating unbiased estimation and valid statistical inference. We also illustrate estimation of a survival distribution under conditionally independent left truncation in a real‐world clinico‐genomic database. John Wiley & Sons, Inc. 2022-03-09 2022 /pmc/articles/PMC9545094/ /pubmed/35262259 http://dx.doi.org/10.1002/pst.2202 Text en © 2022 The Author. Pharmaceutical Statistics published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Main Papers Sondhi, Arjun Estimating survival parameters under conditionally independent left truncation |
title | Estimating survival parameters under conditionally independent left truncation |
title_full | Estimating survival parameters under conditionally independent left truncation |
title_fullStr | Estimating survival parameters under conditionally independent left truncation |
title_full_unstemmed | Estimating survival parameters under conditionally independent left truncation |
title_short | Estimating survival parameters under conditionally independent left truncation |
title_sort | estimating survival parameters under conditionally independent left truncation |
topic | Main Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9545094/ https://www.ncbi.nlm.nih.gov/pubmed/35262259 http://dx.doi.org/10.1002/pst.2202 |
work_keys_str_mv | AT sondhiarjun estimatingsurvivalparametersunderconditionallyindependentlefttruncation |