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FReSCO: Flow Reconstruction and Segmentation for low‐latency Cardiac Output monitoring using deep artifact suppression and segmentation

PURPOSE: Real‐time monitoring of cardiac output (CO) requires low‐latency reconstruction and segmentation of real‐time phase‐contrast MR, which has previously been difficult to perform. Here we propose a deep learning framework for “FReSCO” (Flow Reconstruction and Segmentation for low latency Cardi...

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Detalles Bibliográficos
Autores principales: Jaubert, Olivier, Montalt‐Tordera, Javier, Brown, James, Knight, Daniel, Arridge, Simon, Steeden, Jennifer, Muthurangu, Vivek
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9545927/
https://www.ncbi.nlm.nih.gov/pubmed/35781891
http://dx.doi.org/10.1002/mrm.29374
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author Jaubert, Olivier
Montalt‐Tordera, Javier
Brown, James
Knight, Daniel
Arridge, Simon
Steeden, Jennifer
Muthurangu, Vivek
author_facet Jaubert, Olivier
Montalt‐Tordera, Javier
Brown, James
Knight, Daniel
Arridge, Simon
Steeden, Jennifer
Muthurangu, Vivek
author_sort Jaubert, Olivier
collection PubMed
description PURPOSE: Real‐time monitoring of cardiac output (CO) requires low‐latency reconstruction and segmentation of real‐time phase‐contrast MR, which has previously been difficult to perform. Here we propose a deep learning framework for “FReSCO” (Flow Reconstruction and Segmentation for low latency Cardiac Output monitoring). METHODS: Deep artifact suppression and segmentation U‐Nets were independently trained. Breath‐hold spiral phase‐contrast MR data (N = 516) were synthetically undersampled using a variable‐density spiral sampling pattern and gridded to create aliased data for training of the artifact suppression U‐net. A subset of the data (N = 96) was segmented and used to train the segmentation U‐net. Real‐time spiral phase‐contrast MR was prospectively acquired and then reconstructed and segmented using the trained models (FReSCO) at low latency at the scanner in 10 healthy subjects during rest, exercise, and recovery periods. Cardiac output obtained via FReSCO was compared with a reference rest CO and rest and exercise compressed‐sensing CO. RESULTS: The FReSCO framework was demonstrated prospectively at the scanner. Beat‐to‐beat heartrate, stroke volume, and CO could be visualized with a mean latency of 622 ms. No significant differences were noted when compared with reference at rest (bias = −0.21 ± 0.50 L/min, p = 0.246) or compressed sensing at peak exercise (bias = 0.12 ± 0.48 L/min, p = 0.458). CONCLUSIONS: The FReSCO framework was successfully demonstrated for real‐time monitoring of CO during exercise and could provide a convenient tool for assessment of the hemodynamic response to a range of stressors.
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spelling pubmed-95459272022-10-14 FReSCO: Flow Reconstruction and Segmentation for low‐latency Cardiac Output monitoring using deep artifact suppression and segmentation Jaubert, Olivier Montalt‐Tordera, Javier Brown, James Knight, Daniel Arridge, Simon Steeden, Jennifer Muthurangu, Vivek Magn Reson Med Technical Notes–Imaging Methodology PURPOSE: Real‐time monitoring of cardiac output (CO) requires low‐latency reconstruction and segmentation of real‐time phase‐contrast MR, which has previously been difficult to perform. Here we propose a deep learning framework for “FReSCO” (Flow Reconstruction and Segmentation for low latency Cardiac Output monitoring). METHODS: Deep artifact suppression and segmentation U‐Nets were independently trained. Breath‐hold spiral phase‐contrast MR data (N = 516) were synthetically undersampled using a variable‐density spiral sampling pattern and gridded to create aliased data for training of the artifact suppression U‐net. A subset of the data (N = 96) was segmented and used to train the segmentation U‐net. Real‐time spiral phase‐contrast MR was prospectively acquired and then reconstructed and segmented using the trained models (FReSCO) at low latency at the scanner in 10 healthy subjects during rest, exercise, and recovery periods. Cardiac output obtained via FReSCO was compared with a reference rest CO and rest and exercise compressed‐sensing CO. RESULTS: The FReSCO framework was demonstrated prospectively at the scanner. Beat‐to‐beat heartrate, stroke volume, and CO could be visualized with a mean latency of 622 ms. No significant differences were noted when compared with reference at rest (bias = −0.21 ± 0.50 L/min, p = 0.246) or compressed sensing at peak exercise (bias = 0.12 ± 0.48 L/min, p = 0.458). CONCLUSIONS: The FReSCO framework was successfully demonstrated for real‐time monitoring of CO during exercise and could provide a convenient tool for assessment of the hemodynamic response to a range of stressors. John Wiley and Sons Inc. 2022-07-04 2022-11 /pmc/articles/PMC9545927/ /pubmed/35781891 http://dx.doi.org/10.1002/mrm.29374 Text en © 2022 The Authors. Macromolecular Symposia published by Wiley‐VCH GmbH. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Technical Notes–Imaging Methodology
Jaubert, Olivier
Montalt‐Tordera, Javier
Brown, James
Knight, Daniel
Arridge, Simon
Steeden, Jennifer
Muthurangu, Vivek
FReSCO: Flow Reconstruction and Segmentation for low‐latency Cardiac Output monitoring using deep artifact suppression and segmentation
title FReSCO: Flow Reconstruction and Segmentation for low‐latency Cardiac Output monitoring using deep artifact suppression and segmentation
title_full FReSCO: Flow Reconstruction and Segmentation for low‐latency Cardiac Output monitoring using deep artifact suppression and segmentation
title_fullStr FReSCO: Flow Reconstruction and Segmentation for low‐latency Cardiac Output monitoring using deep artifact suppression and segmentation
title_full_unstemmed FReSCO: Flow Reconstruction and Segmentation for low‐latency Cardiac Output monitoring using deep artifact suppression and segmentation
title_short FReSCO: Flow Reconstruction and Segmentation for low‐latency Cardiac Output monitoring using deep artifact suppression and segmentation
title_sort fresco: flow reconstruction and segmentation for low‐latency cardiac output monitoring using deep artifact suppression and segmentation
topic Technical Notes–Imaging Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9545927/
https://www.ncbi.nlm.nih.gov/pubmed/35781891
http://dx.doi.org/10.1002/mrm.29374
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