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Mixed vine copula flows for flexible modeling of neural dependencies
Recordings of complex neural population responses provide a unique opportunity for advancing our understanding of neural information processing at multiple scales and improving performance of brain computer interfaces. However, most existing analytical techniques fall short of capturing the complexi...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546167/ https://www.ncbi.nlm.nih.gov/pubmed/36213754 http://dx.doi.org/10.3389/fnins.2022.910122 |
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author | Mitskopoulos, Lazaros Amvrosiadis, Theoklitos Onken, Arno |
author_facet | Mitskopoulos, Lazaros Amvrosiadis, Theoklitos Onken, Arno |
author_sort | Mitskopoulos, Lazaros |
collection | PubMed |
description | Recordings of complex neural population responses provide a unique opportunity for advancing our understanding of neural information processing at multiple scales and improving performance of brain computer interfaces. However, most existing analytical techniques fall short of capturing the complexity of interactions within the concerted population activity. Vine copula-based approaches have shown to be successful at addressing complex high-order dependencies within the population, disentangled from the single-neuron statistics. However, most applications have focused on parametric copulas which bear the risk of misspecifying dependence structures. In order to avoid this risk, we adopted a fully non-parametric approach for the single-neuron margins and copulas by using Neural Spline Flows (NSF). We validated the NSF framework on simulated data of continuous and discrete types with various forms of dependency structures and with different dimensionality. Overall, NSFs performed similarly to existing non-parametric estimators, while allowing for considerably faster and more flexible sampling which also enables faster Monte Carlo estimation of copula entropy. Moreover, our framework was able to capture low and higher order heavy tail dependencies in neuronal responses recorded in the mouse primary visual cortex during a visual learning task while the animal was navigating a virtual reality environment. These findings highlight an often ignored aspect of complexity in coordinated neuronal activity which can be important for understanding and deciphering collective neural dynamics for neurotechnological applications. |
format | Online Article Text |
id | pubmed-9546167 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95461672022-10-08 Mixed vine copula flows for flexible modeling of neural dependencies Mitskopoulos, Lazaros Amvrosiadis, Theoklitos Onken, Arno Front Neurosci Neuroscience Recordings of complex neural population responses provide a unique opportunity for advancing our understanding of neural information processing at multiple scales and improving performance of brain computer interfaces. However, most existing analytical techniques fall short of capturing the complexity of interactions within the concerted population activity. Vine copula-based approaches have shown to be successful at addressing complex high-order dependencies within the population, disentangled from the single-neuron statistics. However, most applications have focused on parametric copulas which bear the risk of misspecifying dependence structures. In order to avoid this risk, we adopted a fully non-parametric approach for the single-neuron margins and copulas by using Neural Spline Flows (NSF). We validated the NSF framework on simulated data of continuous and discrete types with various forms of dependency structures and with different dimensionality. Overall, NSFs performed similarly to existing non-parametric estimators, while allowing for considerably faster and more flexible sampling which also enables faster Monte Carlo estimation of copula entropy. Moreover, our framework was able to capture low and higher order heavy tail dependencies in neuronal responses recorded in the mouse primary visual cortex during a visual learning task while the animal was navigating a virtual reality environment. These findings highlight an often ignored aspect of complexity in coordinated neuronal activity which can be important for understanding and deciphering collective neural dynamics for neurotechnological applications. Frontiers Media S.A. 2022-09-23 /pmc/articles/PMC9546167/ /pubmed/36213754 http://dx.doi.org/10.3389/fnins.2022.910122 Text en Copyright © 2022 Mitskopoulos, Amvrosiadis and Onken. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Mitskopoulos, Lazaros Amvrosiadis, Theoklitos Onken, Arno Mixed vine copula flows for flexible modeling of neural dependencies |
title | Mixed vine copula flows for flexible modeling of neural dependencies |
title_full | Mixed vine copula flows for flexible modeling of neural dependencies |
title_fullStr | Mixed vine copula flows for flexible modeling of neural dependencies |
title_full_unstemmed | Mixed vine copula flows for flexible modeling of neural dependencies |
title_short | Mixed vine copula flows for flexible modeling of neural dependencies |
title_sort | mixed vine copula flows for flexible modeling of neural dependencies |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546167/ https://www.ncbi.nlm.nih.gov/pubmed/36213754 http://dx.doi.org/10.3389/fnins.2022.910122 |
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