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Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach
BACKGROUND AND PURPOSE: Although structural disconnection represents the hallmark of multiple sclerosis (MS) pathophysiology, classification attempts based on structural connectivity have achieved low accuracy levels. Here, we set out to fill this gap, exploring the performance of supervised classif...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546205/ https://www.ncbi.nlm.nih.gov/pubmed/35297554 http://dx.doi.org/10.1111/jon.12991 |
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author | Schiavi, Simona Azzari, Alberto Mensi, Antonella Graziano, Nicole Daducci, Alessandro Bicego, Manuele Inglese, Matilde Petracca, Maria |
author_facet | Schiavi, Simona Azzari, Alberto Mensi, Antonella Graziano, Nicole Daducci, Alessandro Bicego, Manuele Inglese, Matilde Petracca, Maria |
author_sort | Schiavi, Simona |
collection | PubMed |
description | BACKGROUND AND PURPOSE: Although structural disconnection represents the hallmark of multiple sclerosis (MS) pathophysiology, classification attempts based on structural connectivity have achieved low accuracy levels. Here, we set out to fill this gap, exploring the performance of supervised classifiers on features derived from microstructure informed tractography and selected applying a novel robust approach. METHODS: Using microstructure informed tractography with diffusion MRI data, we created quantitative connectomes of 55 MS patients and 24 healthy controls. We then used a robust approach—based on two classical methods of feature selection— to select relevant features from three network representations (whole connectivity matrices, node strength, and local efficiency). Classification accuracy of the selected features was tested with five different classifiers, while their meaningfulness was tested via correlation with clinical scales. As a comparison, the same classifiers were run on features selected with the standard procedure in network analysis (thresholding). RESULTS: Our procedure identified 11 features for the whole net, five for local efficiency, and seven for node strength. For all classifiers, the accuracy was in the range 64.5%‐91.1%, with features extracted from the whole net reaching the maximum, and overcoming results obtained with the standard procedure in all cases. Correlations with clinical scales were identified across functional domains, from motor and cognitive abilities to fatigue and depression. CONCLUSION: Applying a robust feature selection procedure to quantitative structural connectomes, we were able to classify MS patients with excellent accuracy, while providing information on the white matter connections and gray matter regions more affected by MS pathology. |
format | Online Article Text |
id | pubmed-9546205 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95462052022-10-14 Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach Schiavi, Simona Azzari, Alberto Mensi, Antonella Graziano, Nicole Daducci, Alessandro Bicego, Manuele Inglese, Matilde Petracca, Maria J Neuroimaging Original Research BACKGROUND AND PURPOSE: Although structural disconnection represents the hallmark of multiple sclerosis (MS) pathophysiology, classification attempts based on structural connectivity have achieved low accuracy levels. Here, we set out to fill this gap, exploring the performance of supervised classifiers on features derived from microstructure informed tractography and selected applying a novel robust approach. METHODS: Using microstructure informed tractography with diffusion MRI data, we created quantitative connectomes of 55 MS patients and 24 healthy controls. We then used a robust approach—based on two classical methods of feature selection— to select relevant features from three network representations (whole connectivity matrices, node strength, and local efficiency). Classification accuracy of the selected features was tested with five different classifiers, while their meaningfulness was tested via correlation with clinical scales. As a comparison, the same classifiers were run on features selected with the standard procedure in network analysis (thresholding). RESULTS: Our procedure identified 11 features for the whole net, five for local efficiency, and seven for node strength. For all classifiers, the accuracy was in the range 64.5%‐91.1%, with features extracted from the whole net reaching the maximum, and overcoming results obtained with the standard procedure in all cases. Correlations with clinical scales were identified across functional domains, from motor and cognitive abilities to fatigue and depression. CONCLUSION: Applying a robust feature selection procedure to quantitative structural connectomes, we were able to classify MS patients with excellent accuracy, while providing information on the white matter connections and gray matter regions more affected by MS pathology. John Wiley and Sons Inc. 2022-03-17 2022 /pmc/articles/PMC9546205/ /pubmed/35297554 http://dx.doi.org/10.1111/jon.12991 Text en © 2022 The Authors. Journal of Neuroimaging published by Wiley Periodicals LLC on behalf of American Society of Neuroimaging. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Original Research Schiavi, Simona Azzari, Alberto Mensi, Antonella Graziano, Nicole Daducci, Alessandro Bicego, Manuele Inglese, Matilde Petracca, Maria Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach |
title | Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach |
title_full | Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach |
title_fullStr | Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach |
title_full_unstemmed | Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach |
title_short | Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach |
title_sort | classification of multiple sclerosis patients based on structural disconnection: a robust feature selection approach |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546205/ https://www.ncbi.nlm.nih.gov/pubmed/35297554 http://dx.doi.org/10.1111/jon.12991 |
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