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Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach

BACKGROUND AND PURPOSE: Although structural disconnection represents the hallmark of multiple sclerosis (MS) pathophysiology, classification attempts based on structural connectivity have achieved low accuracy levels. Here, we set out to fill this gap, exploring the performance of supervised classif...

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Autores principales: Schiavi, Simona, Azzari, Alberto, Mensi, Antonella, Graziano, Nicole, Daducci, Alessandro, Bicego, Manuele, Inglese, Matilde, Petracca, Maria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546205/
https://www.ncbi.nlm.nih.gov/pubmed/35297554
http://dx.doi.org/10.1111/jon.12991
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author Schiavi, Simona
Azzari, Alberto
Mensi, Antonella
Graziano, Nicole
Daducci, Alessandro
Bicego, Manuele
Inglese, Matilde
Petracca, Maria
author_facet Schiavi, Simona
Azzari, Alberto
Mensi, Antonella
Graziano, Nicole
Daducci, Alessandro
Bicego, Manuele
Inglese, Matilde
Petracca, Maria
author_sort Schiavi, Simona
collection PubMed
description BACKGROUND AND PURPOSE: Although structural disconnection represents the hallmark of multiple sclerosis (MS) pathophysiology, classification attempts based on structural connectivity have achieved low accuracy levels. Here, we set out to fill this gap, exploring the performance of supervised classifiers on features derived from microstructure informed tractography and selected applying a novel robust approach. METHODS: Using microstructure informed tractography with diffusion MRI data, we created quantitative connectomes of 55 MS patients and 24 healthy controls. We then used a robust approach—based on two classical methods of feature selection— to select relevant features from three network representations (whole connectivity matrices, node strength, and local efficiency). Classification accuracy of the selected features was tested with five different classifiers, while their meaningfulness was tested via correlation with clinical scales. As a comparison, the same classifiers were run on features selected with the standard procedure in network analysis (thresholding). RESULTS: Our procedure identified 11 features for the whole net, five for local efficiency, and seven for node strength. For all classifiers, the accuracy was in the range 64.5%‐91.1%, with features extracted from the whole net reaching the maximum, and overcoming results obtained with the standard procedure in all cases. Correlations with clinical scales were identified across functional domains, from motor and cognitive abilities to fatigue and depression. CONCLUSION: Applying a robust feature selection procedure to quantitative structural connectomes, we were able to classify MS patients with excellent accuracy, while providing information on the white matter connections and gray matter regions more affected by MS pathology.
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spelling pubmed-95462052022-10-14 Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach Schiavi, Simona Azzari, Alberto Mensi, Antonella Graziano, Nicole Daducci, Alessandro Bicego, Manuele Inglese, Matilde Petracca, Maria J Neuroimaging Original Research BACKGROUND AND PURPOSE: Although structural disconnection represents the hallmark of multiple sclerosis (MS) pathophysiology, classification attempts based on structural connectivity have achieved low accuracy levels. Here, we set out to fill this gap, exploring the performance of supervised classifiers on features derived from microstructure informed tractography and selected applying a novel robust approach. METHODS: Using microstructure informed tractography with diffusion MRI data, we created quantitative connectomes of 55 MS patients and 24 healthy controls. We then used a robust approach—based on two classical methods of feature selection— to select relevant features from three network representations (whole connectivity matrices, node strength, and local efficiency). Classification accuracy of the selected features was tested with five different classifiers, while their meaningfulness was tested via correlation with clinical scales. As a comparison, the same classifiers were run on features selected with the standard procedure in network analysis (thresholding). RESULTS: Our procedure identified 11 features for the whole net, five for local efficiency, and seven for node strength. For all classifiers, the accuracy was in the range 64.5%‐91.1%, with features extracted from the whole net reaching the maximum, and overcoming results obtained with the standard procedure in all cases. Correlations with clinical scales were identified across functional domains, from motor and cognitive abilities to fatigue and depression. CONCLUSION: Applying a robust feature selection procedure to quantitative structural connectomes, we were able to classify MS patients with excellent accuracy, while providing information on the white matter connections and gray matter regions more affected by MS pathology. John Wiley and Sons Inc. 2022-03-17 2022 /pmc/articles/PMC9546205/ /pubmed/35297554 http://dx.doi.org/10.1111/jon.12991 Text en © 2022 The Authors. Journal of Neuroimaging published by Wiley Periodicals LLC on behalf of American Society of Neuroimaging. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Original Research
Schiavi, Simona
Azzari, Alberto
Mensi, Antonella
Graziano, Nicole
Daducci, Alessandro
Bicego, Manuele
Inglese, Matilde
Petracca, Maria
Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach
title Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach
title_full Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach
title_fullStr Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach
title_full_unstemmed Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach
title_short Classification of multiple sclerosis patients based on structural disconnection: A robust feature selection approach
title_sort classification of multiple sclerosis patients based on structural disconnection: a robust feature selection approach
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546205/
https://www.ncbi.nlm.nih.gov/pubmed/35297554
http://dx.doi.org/10.1111/jon.12991
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