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Endotyping allergic rhinitis in children: A machine learning approach

INTRODUCTION: The diversity of allergic rhinitis (AR) phenotypes is particularly evident in childhood, suggesting the need to analyze and identify new approaches to capture such clinical heterogeneity. Nasal cytology (NC) is a very useful diagnostic tool for identifying and quantifying nasal inflamm...

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Autores principales: Malizia, Velia, Cilluffo, Giovanna, Fasola, Salvatore, Ferrante, Giuliana, Landi, Massimo, Montalbano, Laura, Licari, Amelia, La Grutta, Stefania
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546471/
https://www.ncbi.nlm.nih.gov/pubmed/35080305
http://dx.doi.org/10.1111/pai.13620
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author Malizia, Velia
Cilluffo, Giovanna
Fasola, Salvatore
Ferrante, Giuliana
Landi, Massimo
Montalbano, Laura
Licari, Amelia
La Grutta, Stefania
author_facet Malizia, Velia
Cilluffo, Giovanna
Fasola, Salvatore
Ferrante, Giuliana
Landi, Massimo
Montalbano, Laura
Licari, Amelia
La Grutta, Stefania
author_sort Malizia, Velia
collection PubMed
description INTRODUCTION: The diversity of allergic rhinitis (AR) phenotypes is particularly evident in childhood, suggesting the need to analyze and identify new approaches to capture such clinical heterogeneity. Nasal cytology (NC) is a very useful diagnostic tool for identifying and quantifying nasal inflammation. Data‐driven approaches such as latent class analysis (LCA) assign subjects to classes based on their characteristics. We hypothesized that LCA based on NC, including the assessment of neutrophils, eosinophils, and mast cells, may be helpful for identifying AR endotypes in children. METHODS: A total of 168 children were enrolled. Sociodemographic characteristics and detailed medical history were obtained from their parents. All children performed NC and skin prick tests. LCA was applied for identifying AR endotypes based on NC, using the R package poLCA. All the statistical analyses were performed using R 4.0.5 software. Statistical significance was set at p ≤ .05. RESULTS: LCA identified two classes: Class 1 (n = 126, 75%): higher frequency of children with moderate/large number of neutrophils (31.45%); almost all the children in this class had no mast cells (91.27%) and Class 2 (n = 42, 25%): higher frequency of children with moderate/large number of eosinophils (45.24%) and moderate/large number of mast cells (50%). CONCLUSIONS: The present study used a machine learning approach for endotyping childhood AR, which may contribute to improve the diagnostic accuracy and to deliver personalized health care in the context of precision medicine.
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spelling pubmed-95464712022-10-14 Endotyping allergic rhinitis in children: A machine learning approach Malizia, Velia Cilluffo, Giovanna Fasola, Salvatore Ferrante, Giuliana Landi, Massimo Montalbano, Laura Licari, Amelia La Grutta, Stefania Pediatr Allergy Immunol Special Issue: 2021 Update From The Italian Society Of Pediatric Allergy And Immunology INTRODUCTION: The diversity of allergic rhinitis (AR) phenotypes is particularly evident in childhood, suggesting the need to analyze and identify new approaches to capture such clinical heterogeneity. Nasal cytology (NC) is a very useful diagnostic tool for identifying and quantifying nasal inflammation. Data‐driven approaches such as latent class analysis (LCA) assign subjects to classes based on their characteristics. We hypothesized that LCA based on NC, including the assessment of neutrophils, eosinophils, and mast cells, may be helpful for identifying AR endotypes in children. METHODS: A total of 168 children were enrolled. Sociodemographic characteristics and detailed medical history were obtained from their parents. All children performed NC and skin prick tests. LCA was applied for identifying AR endotypes based on NC, using the R package poLCA. All the statistical analyses were performed using R 4.0.5 software. Statistical significance was set at p ≤ .05. RESULTS: LCA identified two classes: Class 1 (n = 126, 75%): higher frequency of children with moderate/large number of neutrophils (31.45%); almost all the children in this class had no mast cells (91.27%) and Class 2 (n = 42, 25%): higher frequency of children with moderate/large number of eosinophils (45.24%) and moderate/large number of mast cells (50%). CONCLUSIONS: The present study used a machine learning approach for endotyping childhood AR, which may contribute to improve the diagnostic accuracy and to deliver personalized health care in the context of precision medicine. John Wiley and Sons Inc. 2022-01-25 2022-01 /pmc/articles/PMC9546471/ /pubmed/35080305 http://dx.doi.org/10.1111/pai.13620 Text en © 2022 The Authors. Pediatric Allergy and Immunology published by European Academy of Allergy and Clinical Immunology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Special Issue: 2021 Update From The Italian Society Of Pediatric Allergy And Immunology
Malizia, Velia
Cilluffo, Giovanna
Fasola, Salvatore
Ferrante, Giuliana
Landi, Massimo
Montalbano, Laura
Licari, Amelia
La Grutta, Stefania
Endotyping allergic rhinitis in children: A machine learning approach
title Endotyping allergic rhinitis in children: A machine learning approach
title_full Endotyping allergic rhinitis in children: A machine learning approach
title_fullStr Endotyping allergic rhinitis in children: A machine learning approach
title_full_unstemmed Endotyping allergic rhinitis in children: A machine learning approach
title_short Endotyping allergic rhinitis in children: A machine learning approach
title_sort endotyping allergic rhinitis in children: a machine learning approach
topic Special Issue: 2021 Update From The Italian Society Of Pediatric Allergy And Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546471/
https://www.ncbi.nlm.nih.gov/pubmed/35080305
http://dx.doi.org/10.1111/pai.13620
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