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Label free electrochemical DNA biosensor for COVID-19 diagnosis

The COVID-19 pandemic has significantly increased the development of the development of point-of-care (POC) diagnostic tools because they can serve as useful tools for detecting and controlling spread of the disease. Most current methods require sophisticated laboratory instruments and specialists t...

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Autores principales: Lomae, Atchara, Preechakasedkit, Pattarachaya, Hanpanich, Orakan, Ozer, Tugba, Henry, Charles S., Maruyama, Atsushi, Pasomsub, Ekawat, Phuphuakrat, Angsana, Rengpipat, Sirirat, Vilaivan, Tirayut, Chailapakul, Orawon, Ruecha, Nipapan, Ngamrojanavanich, Nattaya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546783/
https://www.ncbi.nlm.nih.gov/pubmed/36228554
http://dx.doi.org/10.1016/j.talanta.2022.123992
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author Lomae, Atchara
Preechakasedkit, Pattarachaya
Hanpanich, Orakan
Ozer, Tugba
Henry, Charles S.
Maruyama, Atsushi
Pasomsub, Ekawat
Phuphuakrat, Angsana
Rengpipat, Sirirat
Vilaivan, Tirayut
Chailapakul, Orawon
Ruecha, Nipapan
Ngamrojanavanich, Nattaya
author_facet Lomae, Atchara
Preechakasedkit, Pattarachaya
Hanpanich, Orakan
Ozer, Tugba
Henry, Charles S.
Maruyama, Atsushi
Pasomsub, Ekawat
Phuphuakrat, Angsana
Rengpipat, Sirirat
Vilaivan, Tirayut
Chailapakul, Orawon
Ruecha, Nipapan
Ngamrojanavanich, Nattaya
author_sort Lomae, Atchara
collection PubMed
description The COVID-19 pandemic has significantly increased the development of the development of point-of-care (POC) diagnostic tools because they can serve as useful tools for detecting and controlling spread of the disease. Most current methods require sophisticated laboratory instruments and specialists to provide reliable, cost-effective, specific, and sensitive POC testing for COVID-19 diagnosis. Here, a smartphone-assisted Sensit Smart potentiostat (PalmSens) was integrated with a paper-based electrochemical sensor to detect severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). A disposable paper-based device was fabricated, and the working electrode directly modified with a pyrrolidinyl peptide nucleic acid (acpcPNA) as the biological recognition element to capture the target complementary DNA (cDNA). In the presence of the target cDNA, hybridization with acpcPNA probe blocks the redox conversion of a redox reporter, leading to a decrease in electrochemical response correlating to SARS-CoV-2 concentration. Under optimal conditions, a linear range from 0.1 to 200 nM and a detection limit of 1.0 pM were obtained. The PNA-based electrochemical paper-based analytical device (PNA-based ePAD) offers high specificity toward SARS-CoV-2 N gene because of the highly selective PNA-DNA binding. The developed sensor was used for amplification-free SARS-CoV-2 detection in 10 nasopharyngeal swab samples (7 SARS-CoV-2 positive and 3 SARS-CoV-2 negative), giving a 100% agreement result with RT-PCR.
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spelling pubmed-95467832022-10-11 Label free electrochemical DNA biosensor for COVID-19 diagnosis Lomae, Atchara Preechakasedkit, Pattarachaya Hanpanich, Orakan Ozer, Tugba Henry, Charles S. Maruyama, Atsushi Pasomsub, Ekawat Phuphuakrat, Angsana Rengpipat, Sirirat Vilaivan, Tirayut Chailapakul, Orawon Ruecha, Nipapan Ngamrojanavanich, Nattaya Talanta Article The COVID-19 pandemic has significantly increased the development of the development of point-of-care (POC) diagnostic tools because they can serve as useful tools for detecting and controlling spread of the disease. Most current methods require sophisticated laboratory instruments and specialists to provide reliable, cost-effective, specific, and sensitive POC testing for COVID-19 diagnosis. Here, a smartphone-assisted Sensit Smart potentiostat (PalmSens) was integrated with a paper-based electrochemical sensor to detect severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). A disposable paper-based device was fabricated, and the working electrode directly modified with a pyrrolidinyl peptide nucleic acid (acpcPNA) as the biological recognition element to capture the target complementary DNA (cDNA). In the presence of the target cDNA, hybridization with acpcPNA probe blocks the redox conversion of a redox reporter, leading to a decrease in electrochemical response correlating to SARS-CoV-2 concentration. Under optimal conditions, a linear range from 0.1 to 200 nM and a detection limit of 1.0 pM were obtained. The PNA-based electrochemical paper-based analytical device (PNA-based ePAD) offers high specificity toward SARS-CoV-2 N gene because of the highly selective PNA-DNA binding. The developed sensor was used for amplification-free SARS-CoV-2 detection in 10 nasopharyngeal swab samples (7 SARS-CoV-2 positive and 3 SARS-CoV-2 negative), giving a 100% agreement result with RT-PCR. Elsevier B.V. 2023-02-01 2022-10-08 /pmc/articles/PMC9546783/ /pubmed/36228554 http://dx.doi.org/10.1016/j.talanta.2022.123992 Text en © 2022 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Lomae, Atchara
Preechakasedkit, Pattarachaya
Hanpanich, Orakan
Ozer, Tugba
Henry, Charles S.
Maruyama, Atsushi
Pasomsub, Ekawat
Phuphuakrat, Angsana
Rengpipat, Sirirat
Vilaivan, Tirayut
Chailapakul, Orawon
Ruecha, Nipapan
Ngamrojanavanich, Nattaya
Label free electrochemical DNA biosensor for COVID-19 diagnosis
title Label free electrochemical DNA biosensor for COVID-19 diagnosis
title_full Label free electrochemical DNA biosensor for COVID-19 diagnosis
title_fullStr Label free electrochemical DNA biosensor for COVID-19 diagnosis
title_full_unstemmed Label free electrochemical DNA biosensor for COVID-19 diagnosis
title_short Label free electrochemical DNA biosensor for COVID-19 diagnosis
title_sort label free electrochemical dna biosensor for covid-19 diagnosis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546783/
https://www.ncbi.nlm.nih.gov/pubmed/36228554
http://dx.doi.org/10.1016/j.talanta.2022.123992
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