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Community detection in networks by dynamical optimal transport formulation

Detecting communities in networks is important in various domains of applications. While a variety of methods exist to perform this task, recent efforts propose Optimal Transport (OT) principles combined with the geometric notion of Ollivier–Ricci curvature to classify nodes into groups by rigorousl...

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Autores principales: Leite, Daniela, Baptista, Diego, Ibrahim, Abdullahi A., Facca, Enrico, De Bacco, Caterina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546897/
https://www.ncbi.nlm.nih.gov/pubmed/36207412
http://dx.doi.org/10.1038/s41598-022-20986-y
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author Leite, Daniela
Baptista, Diego
Ibrahim, Abdullahi A.
Facca, Enrico
De Bacco, Caterina
author_facet Leite, Daniela
Baptista, Diego
Ibrahim, Abdullahi A.
Facca, Enrico
De Bacco, Caterina
author_sort Leite, Daniela
collection PubMed
description Detecting communities in networks is important in various domains of applications. While a variety of methods exist to perform this task, recent efforts propose Optimal Transport (OT) principles combined with the geometric notion of Ollivier–Ricci curvature to classify nodes into groups by rigorously comparing the information encoded into nodes’ neighborhoods. We present an OT-based approach that exploits recent advances in OT theory to allow tuning between different transportation regimes. This allows for better control of the information shared between nodes’ neighborhoods. As a result, our model can flexibly capture different types of network structures and thus increase performance accuracy in recovering communities, compared to standard OT-based formulations. We test the performance of our algorithm on both synthetic and real networks, achieving a comparable or better performance than other OT-based methods in the former case, while finding communities that better represent node metadata in real data. This pushes further our understanding of geometric approaches in their ability to capture patterns in complex networks.
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spelling pubmed-95468972022-10-09 Community detection in networks by dynamical optimal transport formulation Leite, Daniela Baptista, Diego Ibrahim, Abdullahi A. Facca, Enrico De Bacco, Caterina Sci Rep Article Detecting communities in networks is important in various domains of applications. While a variety of methods exist to perform this task, recent efforts propose Optimal Transport (OT) principles combined with the geometric notion of Ollivier–Ricci curvature to classify nodes into groups by rigorously comparing the information encoded into nodes’ neighborhoods. We present an OT-based approach that exploits recent advances in OT theory to allow tuning between different transportation regimes. This allows for better control of the information shared between nodes’ neighborhoods. As a result, our model can flexibly capture different types of network structures and thus increase performance accuracy in recovering communities, compared to standard OT-based formulations. We test the performance of our algorithm on both synthetic and real networks, achieving a comparable or better performance than other OT-based methods in the former case, while finding communities that better represent node metadata in real data. This pushes further our understanding of geometric approaches in their ability to capture patterns in complex networks. Nature Publishing Group UK 2022-10-07 /pmc/articles/PMC9546897/ /pubmed/36207412 http://dx.doi.org/10.1038/s41598-022-20986-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Leite, Daniela
Baptista, Diego
Ibrahim, Abdullahi A.
Facca, Enrico
De Bacco, Caterina
Community detection in networks by dynamical optimal transport formulation
title Community detection in networks by dynamical optimal transport formulation
title_full Community detection in networks by dynamical optimal transport formulation
title_fullStr Community detection in networks by dynamical optimal transport formulation
title_full_unstemmed Community detection in networks by dynamical optimal transport formulation
title_short Community detection in networks by dynamical optimal transport formulation
title_sort community detection in networks by dynamical optimal transport formulation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546897/
https://www.ncbi.nlm.nih.gov/pubmed/36207412
http://dx.doi.org/10.1038/s41598-022-20986-y
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