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Community detection in networks by dynamical optimal transport formulation
Detecting communities in networks is important in various domains of applications. While a variety of methods exist to perform this task, recent efforts propose Optimal Transport (OT) principles combined with the geometric notion of Ollivier–Ricci curvature to classify nodes into groups by rigorousl...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546897/ https://www.ncbi.nlm.nih.gov/pubmed/36207412 http://dx.doi.org/10.1038/s41598-022-20986-y |
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author | Leite, Daniela Baptista, Diego Ibrahim, Abdullahi A. Facca, Enrico De Bacco, Caterina |
author_facet | Leite, Daniela Baptista, Diego Ibrahim, Abdullahi A. Facca, Enrico De Bacco, Caterina |
author_sort | Leite, Daniela |
collection | PubMed |
description | Detecting communities in networks is important in various domains of applications. While a variety of methods exist to perform this task, recent efforts propose Optimal Transport (OT) principles combined with the geometric notion of Ollivier–Ricci curvature to classify nodes into groups by rigorously comparing the information encoded into nodes’ neighborhoods. We present an OT-based approach that exploits recent advances in OT theory to allow tuning between different transportation regimes. This allows for better control of the information shared between nodes’ neighborhoods. As a result, our model can flexibly capture different types of network structures and thus increase performance accuracy in recovering communities, compared to standard OT-based formulations. We test the performance of our algorithm on both synthetic and real networks, achieving a comparable or better performance than other OT-based methods in the former case, while finding communities that better represent node metadata in real data. This pushes further our understanding of geometric approaches in their ability to capture patterns in complex networks. |
format | Online Article Text |
id | pubmed-9546897 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-95468972022-10-09 Community detection in networks by dynamical optimal transport formulation Leite, Daniela Baptista, Diego Ibrahim, Abdullahi A. Facca, Enrico De Bacco, Caterina Sci Rep Article Detecting communities in networks is important in various domains of applications. While a variety of methods exist to perform this task, recent efforts propose Optimal Transport (OT) principles combined with the geometric notion of Ollivier–Ricci curvature to classify nodes into groups by rigorously comparing the information encoded into nodes’ neighborhoods. We present an OT-based approach that exploits recent advances in OT theory to allow tuning between different transportation regimes. This allows for better control of the information shared between nodes’ neighborhoods. As a result, our model can flexibly capture different types of network structures and thus increase performance accuracy in recovering communities, compared to standard OT-based formulations. We test the performance of our algorithm on both synthetic and real networks, achieving a comparable or better performance than other OT-based methods in the former case, while finding communities that better represent node metadata in real data. This pushes further our understanding of geometric approaches in their ability to capture patterns in complex networks. Nature Publishing Group UK 2022-10-07 /pmc/articles/PMC9546897/ /pubmed/36207412 http://dx.doi.org/10.1038/s41598-022-20986-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Leite, Daniela Baptista, Diego Ibrahim, Abdullahi A. Facca, Enrico De Bacco, Caterina Community detection in networks by dynamical optimal transport formulation |
title | Community detection in networks by dynamical optimal transport formulation |
title_full | Community detection in networks by dynamical optimal transport formulation |
title_fullStr | Community detection in networks by dynamical optimal transport formulation |
title_full_unstemmed | Community detection in networks by dynamical optimal transport formulation |
title_short | Community detection in networks by dynamical optimal transport formulation |
title_sort | community detection in networks by dynamical optimal transport formulation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9546897/ https://www.ncbi.nlm.nih.gov/pubmed/36207412 http://dx.doi.org/10.1038/s41598-022-20986-y |
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