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Deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging
Significance: Quantitative optoacoustic imaging (QOAI) continues to be a challenge due to the influence of nonlinear optical fluence distribution, which distorts the optoacoustic image representation. Nonlinear optical fluence correction in OA imaging is highly ill-posed, leading to the inaccurate r...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society of Photo-Optical Instrumentation Engineers
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9547608/ https://www.ncbi.nlm.nih.gov/pubmed/36209354 http://dx.doi.org/10.1117/1.JBO.27.10.106004 |
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author | Madasamy, Arumugaraj Gujrati, Vipul Ntziachristos, Vasilis Prakash, Jaya |
author_facet | Madasamy, Arumugaraj Gujrati, Vipul Ntziachristos, Vasilis Prakash, Jaya |
author_sort | Madasamy, Arumugaraj |
collection | PubMed |
description | Significance: Quantitative optoacoustic imaging (QOAI) continues to be a challenge due to the influence of nonlinear optical fluence distribution, which distorts the optoacoustic image representation. Nonlinear optical fluence correction in OA imaging is highly ill-posed, leading to the inaccurate recovery of optical absorption maps. This work aims to recover the optical absorption maps using deep learning (DL) approach by correcting for the fluence effect. Aim: Different DL models were compared and investigated to enable optical absorption coefficient recovery at a particular wavelength in a nonhomogeneous foreground and background medium. Approach: Data-driven models were trained with two-dimensional (2D) Blood vessel and three-dimensional (3D) numerical breast phantom with highly heterogeneous/realistic structures to correct for the nonlinear optical fluence distribution. The trained DL models such as U-Net, Fully Dense (FD) U-Net, Y-Net, FD Y-Net, Deep residual U-Net (Deep ResU-Net), and generative adversarial network (GAN) were tested to evaluate the performance of optical absorption coefficient recovery (or fluence compensation) with in-silico and in-vivo datasets. Results: The results indicated that FD U-Net-based deconvolution improves by about 10% over reconstructed optoacoustic images in terms of peak-signal-to-noise ratio. Further, it was observed that DL models can indeed highlight deep-seated structures with higher contrast due to fluence compensation. Importantly, the DL models were found to be about 17 times faster than solving diffusion equation for fluence correction. Conclusions: The DL methods were able to compensate for nonlinear optical fluence distribution more effectively and improve the optoacoustic image quality. |
format | Online Article Text |
id | pubmed-9547608 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Society of Photo-Optical Instrumentation Engineers |
record_format | MEDLINE/PubMed |
spelling | pubmed-95476082022-10-11 Deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging Madasamy, Arumugaraj Gujrati, Vipul Ntziachristos, Vasilis Prakash, Jaya J Biomed Opt Imaging Significance: Quantitative optoacoustic imaging (QOAI) continues to be a challenge due to the influence of nonlinear optical fluence distribution, which distorts the optoacoustic image representation. Nonlinear optical fluence correction in OA imaging is highly ill-posed, leading to the inaccurate recovery of optical absorption maps. This work aims to recover the optical absorption maps using deep learning (DL) approach by correcting for the fluence effect. Aim: Different DL models were compared and investigated to enable optical absorption coefficient recovery at a particular wavelength in a nonhomogeneous foreground and background medium. Approach: Data-driven models were trained with two-dimensional (2D) Blood vessel and three-dimensional (3D) numerical breast phantom with highly heterogeneous/realistic structures to correct for the nonlinear optical fluence distribution. The trained DL models such as U-Net, Fully Dense (FD) U-Net, Y-Net, FD Y-Net, Deep residual U-Net (Deep ResU-Net), and generative adversarial network (GAN) were tested to evaluate the performance of optical absorption coefficient recovery (or fluence compensation) with in-silico and in-vivo datasets. Results: The results indicated that FD U-Net-based deconvolution improves by about 10% over reconstructed optoacoustic images in terms of peak-signal-to-noise ratio. Further, it was observed that DL models can indeed highlight deep-seated structures with higher contrast due to fluence compensation. Importantly, the DL models were found to be about 17 times faster than solving diffusion equation for fluence correction. Conclusions: The DL methods were able to compensate for nonlinear optical fluence distribution more effectively and improve the optoacoustic image quality. Society of Photo-Optical Instrumentation Engineers 2022-10-08 2022-10 /pmc/articles/PMC9547608/ /pubmed/36209354 http://dx.doi.org/10.1117/1.JBO.27.10.106004 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/Published by SPIE under a Creative Commons Attribution 4.0 International License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI. |
spellingShingle | Imaging Madasamy, Arumugaraj Gujrati, Vipul Ntziachristos, Vasilis Prakash, Jaya Deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging |
title | Deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging |
title_full | Deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging |
title_fullStr | Deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging |
title_full_unstemmed | Deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging |
title_short | Deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging |
title_sort | deep learning methods hold promise for light fluence compensation in three-dimensional optoacoustic imaging |
topic | Imaging |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9547608/ https://www.ncbi.nlm.nih.gov/pubmed/36209354 http://dx.doi.org/10.1117/1.JBO.27.10.106004 |
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