Cargando…

Explanatory classification of CXR images into COVID-19, Pneumonia and Tuberculosis using deep learning and XAI

Chest X-ray (CXR) images are considered useful to monitor and investigate a variety of pulmonary disorders such as COVID-19, Pneumonia, and Tuberculosis (TB). With recent technological advancements, such diseases may now be recognized more precisely using computer-assisted diagnostics. Without compr...

Descripción completa

Detalles Bibliográficos
Autores principales: Bhandari, Mohan, Shahi, Tej Bahadur, Siku, Birat, Neupane, Arjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9549800/
https://www.ncbi.nlm.nih.gov/pubmed/36228463
http://dx.doi.org/10.1016/j.compbiomed.2022.106156
_version_ 1784805751490871296
author Bhandari, Mohan
Shahi, Tej Bahadur
Siku, Birat
Neupane, Arjun
author_facet Bhandari, Mohan
Shahi, Tej Bahadur
Siku, Birat
Neupane, Arjun
author_sort Bhandari, Mohan
collection PubMed
description Chest X-ray (CXR) images are considered useful to monitor and investigate a variety of pulmonary disorders such as COVID-19, Pneumonia, and Tuberculosis (TB). With recent technological advancements, such diseases may now be recognized more precisely using computer-assisted diagnostics. Without compromising the classification accuracy and better feature extraction, deep learning (DL) model to predict four different categories is proposed in this study. The proposed model is validated with publicly available datasets of 7132 chest x-ray (CXR) images. Furthermore, results are interpreted and explained using Gradient-weighted Class Activation Mapping (Grad-CAM), Local Interpretable Modelagnostic Explanation (LIME), and SHapley Additive exPlanation (SHAP) for better understandably. Initially, convolution features are extracted to collect high-level object-based information. Next, shapely values from SHAP, predictability results from LIME, and heatmap from Grad-CAM are used to explore the black-box approach of the DL model, achieving average test accuracy of 94.31 ± 1.01% and validation accuracy of 94.54 ± 1.33 for 10-fold cross validation. Finally, in order to validate the model and qualify medical risk, medical sensations of classification are taken to consolidate the explanations generated from the eXplainable Artificial Intelligence (XAI) framework. The results suggest that XAI and DL models give clinicians/medical professionals persuasive and coherent conclusions related to the detection and categorization of COVID-19, Pneumonia, and TB.
format Online
Article
Text
id pubmed-9549800
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-95498002022-10-11 Explanatory classification of CXR images into COVID-19, Pneumonia and Tuberculosis using deep learning and XAI Bhandari, Mohan Shahi, Tej Bahadur Siku, Birat Neupane, Arjun Comput Biol Med Article Chest X-ray (CXR) images are considered useful to monitor and investigate a variety of pulmonary disorders such as COVID-19, Pneumonia, and Tuberculosis (TB). With recent technological advancements, such diseases may now be recognized more precisely using computer-assisted diagnostics. Without compromising the classification accuracy and better feature extraction, deep learning (DL) model to predict four different categories is proposed in this study. The proposed model is validated with publicly available datasets of 7132 chest x-ray (CXR) images. Furthermore, results are interpreted and explained using Gradient-weighted Class Activation Mapping (Grad-CAM), Local Interpretable Modelagnostic Explanation (LIME), and SHapley Additive exPlanation (SHAP) for better understandably. Initially, convolution features are extracted to collect high-level object-based information. Next, shapely values from SHAP, predictability results from LIME, and heatmap from Grad-CAM are used to explore the black-box approach of the DL model, achieving average test accuracy of 94.31 ± 1.01% and validation accuracy of 94.54 ± 1.33 for 10-fold cross validation. Finally, in order to validate the model and qualify medical risk, medical sensations of classification are taken to consolidate the explanations generated from the eXplainable Artificial Intelligence (XAI) framework. The results suggest that XAI and DL models give clinicians/medical professionals persuasive and coherent conclusions related to the detection and categorization of COVID-19, Pneumonia, and TB. Elsevier Ltd. 2022-11 2022-10-03 /pmc/articles/PMC9549800/ /pubmed/36228463 http://dx.doi.org/10.1016/j.compbiomed.2022.106156 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Bhandari, Mohan
Shahi, Tej Bahadur
Siku, Birat
Neupane, Arjun
Explanatory classification of CXR images into COVID-19, Pneumonia and Tuberculosis using deep learning and XAI
title Explanatory classification of CXR images into COVID-19, Pneumonia and Tuberculosis using deep learning and XAI
title_full Explanatory classification of CXR images into COVID-19, Pneumonia and Tuberculosis using deep learning and XAI
title_fullStr Explanatory classification of CXR images into COVID-19, Pneumonia and Tuberculosis using deep learning and XAI
title_full_unstemmed Explanatory classification of CXR images into COVID-19, Pneumonia and Tuberculosis using deep learning and XAI
title_short Explanatory classification of CXR images into COVID-19, Pneumonia and Tuberculosis using deep learning and XAI
title_sort explanatory classification of cxr images into covid-19, pneumonia and tuberculosis using deep learning and xai
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9549800/
https://www.ncbi.nlm.nih.gov/pubmed/36228463
http://dx.doi.org/10.1016/j.compbiomed.2022.106156
work_keys_str_mv AT bhandarimohan explanatoryclassificationofcxrimagesintocovid19pneumoniaandtuberculosisusingdeeplearningandxai
AT shahitejbahadur explanatoryclassificationofcxrimagesintocovid19pneumoniaandtuberculosisusingdeeplearningandxai
AT sikubirat explanatoryclassificationofcxrimagesintocovid19pneumoniaandtuberculosisusingdeeplearningandxai
AT neupanearjun explanatoryclassificationofcxrimagesintocovid19pneumoniaandtuberculosisusingdeeplearningandxai