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A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data

Addiction to methamphetamine (MA) is a major public health concern. Developing a predictive model that can classify and characterize the brain-based biomarkers predicting MA addicts may directly lead to improved treatment outcomes. In the current study, we applied the support vector machine (SVM)-ba...

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Autores principales: Zhou, Yanan, Tang, Jingsong, Sun, Yunkai, Yang, Winson Fu Zun, Ma, Yuejiao, Wu, Qiuxia, Chen, Shubao, Wang, Qianjin, Hao, Yuzhu, Wang, Yunfei, Li, Manyun, Liu, Tieqiao, Liao, Yanhui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9550874/
https://www.ncbi.nlm.nih.gov/pubmed/36238830
http://dx.doi.org/10.3389/fncel.2022.958437
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author Zhou, Yanan
Tang, Jingsong
Sun, Yunkai
Yang, Winson Fu Zun
Ma, Yuejiao
Wu, Qiuxia
Chen, Shubao
Wang, Qianjin
Hao, Yuzhu
Wang, Yunfei
Li, Manyun
Liu, Tieqiao
Liao, Yanhui
author_facet Zhou, Yanan
Tang, Jingsong
Sun, Yunkai
Yang, Winson Fu Zun
Ma, Yuejiao
Wu, Qiuxia
Chen, Shubao
Wang, Qianjin
Hao, Yuzhu
Wang, Yunfei
Li, Manyun
Liu, Tieqiao
Liao, Yanhui
author_sort Zhou, Yanan
collection PubMed
description Addiction to methamphetamine (MA) is a major public health concern. Developing a predictive model that can classify and characterize the brain-based biomarkers predicting MA addicts may directly lead to improved treatment outcomes. In the current study, we applied the support vector machine (SVM)-based classification method to resting-state functional magnetic resonance imaging (rs-fMRI) data obtained from individuals with methamphetamine use disorder (MUD) and healthy controls (HCs) to identify brain-based features predictive of MUD. Brain connectivity analyses were conducted for 36 individuals with MUD as well as 37 HCs based on the brainnetome atlas, and the neighborhood component analysis was applied for feature selection. Eighteen most relevant features were screened out and fed into the SVM to classify the data. The classifier was able to differentiate individuals with MUD from HCs with a high prediction accuracy, sensitivity, specificity, and AUC of 88.00, 86.84, 89.19, and 0.94, respectively. The top six discriminative features associated with changes in the functional activity of key nodes in the default mode network (DMN), all the remaining discriminative features are related to the thalamic connections within the cortico-striato-thalamo-cortical (CSTC) loop. In addition, the functional connectivity (FC) between the bilateral inferior parietal lobule (IPL) and right cingulate gyrus (CG) was significantly correlated with the duration of methamphetamine use. The results of this study not only indicated that MUD-related FC alterations were predictive of group membership, but also suggested that machine learning techniques could be used for the identification of MUD-related imaging biomarkers.
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spelling pubmed-95508742022-10-12 A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data Zhou, Yanan Tang, Jingsong Sun, Yunkai Yang, Winson Fu Zun Ma, Yuejiao Wu, Qiuxia Chen, Shubao Wang, Qianjin Hao, Yuzhu Wang, Yunfei Li, Manyun Liu, Tieqiao Liao, Yanhui Front Cell Neurosci Cellular Neuroscience Addiction to methamphetamine (MA) is a major public health concern. Developing a predictive model that can classify and characterize the brain-based biomarkers predicting MA addicts may directly lead to improved treatment outcomes. In the current study, we applied the support vector machine (SVM)-based classification method to resting-state functional magnetic resonance imaging (rs-fMRI) data obtained from individuals with methamphetamine use disorder (MUD) and healthy controls (HCs) to identify brain-based features predictive of MUD. Brain connectivity analyses were conducted for 36 individuals with MUD as well as 37 HCs based on the brainnetome atlas, and the neighborhood component analysis was applied for feature selection. Eighteen most relevant features were screened out and fed into the SVM to classify the data. The classifier was able to differentiate individuals with MUD from HCs with a high prediction accuracy, sensitivity, specificity, and AUC of 88.00, 86.84, 89.19, and 0.94, respectively. The top six discriminative features associated with changes in the functional activity of key nodes in the default mode network (DMN), all the remaining discriminative features are related to the thalamic connections within the cortico-striato-thalamo-cortical (CSTC) loop. In addition, the functional connectivity (FC) between the bilateral inferior parietal lobule (IPL) and right cingulate gyrus (CG) was significantly correlated with the duration of methamphetamine use. The results of this study not only indicated that MUD-related FC alterations were predictive of group membership, but also suggested that machine learning techniques could be used for the identification of MUD-related imaging biomarkers. Frontiers Media S.A. 2022-09-27 /pmc/articles/PMC9550874/ /pubmed/36238830 http://dx.doi.org/10.3389/fncel.2022.958437 Text en Copyright © 2022 Zhou, Tang, Sun, Yang, Ma, Wu, Chen, Wang, Hao, Wang, Li, Liu and Liao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cellular Neuroscience
Zhou, Yanan
Tang, Jingsong
Sun, Yunkai
Yang, Winson Fu Zun
Ma, Yuejiao
Wu, Qiuxia
Chen, Shubao
Wang, Qianjin
Hao, Yuzhu
Wang, Yunfei
Li, Manyun
Liu, Tieqiao
Liao, Yanhui
A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data
title A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data
title_full A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data
title_fullStr A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data
title_full_unstemmed A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data
title_short A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data
title_sort brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional mri data
topic Cellular Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9550874/
https://www.ncbi.nlm.nih.gov/pubmed/36238830
http://dx.doi.org/10.3389/fncel.2022.958437
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