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A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data
Addiction to methamphetamine (MA) is a major public health concern. Developing a predictive model that can classify and characterize the brain-based biomarkers predicting MA addicts may directly lead to improved treatment outcomes. In the current study, we applied the support vector machine (SVM)-ba...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9550874/ https://www.ncbi.nlm.nih.gov/pubmed/36238830 http://dx.doi.org/10.3389/fncel.2022.958437 |
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author | Zhou, Yanan Tang, Jingsong Sun, Yunkai Yang, Winson Fu Zun Ma, Yuejiao Wu, Qiuxia Chen, Shubao Wang, Qianjin Hao, Yuzhu Wang, Yunfei Li, Manyun Liu, Tieqiao Liao, Yanhui |
author_facet | Zhou, Yanan Tang, Jingsong Sun, Yunkai Yang, Winson Fu Zun Ma, Yuejiao Wu, Qiuxia Chen, Shubao Wang, Qianjin Hao, Yuzhu Wang, Yunfei Li, Manyun Liu, Tieqiao Liao, Yanhui |
author_sort | Zhou, Yanan |
collection | PubMed |
description | Addiction to methamphetamine (MA) is a major public health concern. Developing a predictive model that can classify and characterize the brain-based biomarkers predicting MA addicts may directly lead to improved treatment outcomes. In the current study, we applied the support vector machine (SVM)-based classification method to resting-state functional magnetic resonance imaging (rs-fMRI) data obtained from individuals with methamphetamine use disorder (MUD) and healthy controls (HCs) to identify brain-based features predictive of MUD. Brain connectivity analyses were conducted for 36 individuals with MUD as well as 37 HCs based on the brainnetome atlas, and the neighborhood component analysis was applied for feature selection. Eighteen most relevant features were screened out and fed into the SVM to classify the data. The classifier was able to differentiate individuals with MUD from HCs with a high prediction accuracy, sensitivity, specificity, and AUC of 88.00, 86.84, 89.19, and 0.94, respectively. The top six discriminative features associated with changes in the functional activity of key nodes in the default mode network (DMN), all the remaining discriminative features are related to the thalamic connections within the cortico-striato-thalamo-cortical (CSTC) loop. In addition, the functional connectivity (FC) between the bilateral inferior parietal lobule (IPL) and right cingulate gyrus (CG) was significantly correlated with the duration of methamphetamine use. The results of this study not only indicated that MUD-related FC alterations were predictive of group membership, but also suggested that machine learning techniques could be used for the identification of MUD-related imaging biomarkers. |
format | Online Article Text |
id | pubmed-9550874 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95508742022-10-12 A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data Zhou, Yanan Tang, Jingsong Sun, Yunkai Yang, Winson Fu Zun Ma, Yuejiao Wu, Qiuxia Chen, Shubao Wang, Qianjin Hao, Yuzhu Wang, Yunfei Li, Manyun Liu, Tieqiao Liao, Yanhui Front Cell Neurosci Cellular Neuroscience Addiction to methamphetamine (MA) is a major public health concern. Developing a predictive model that can classify and characterize the brain-based biomarkers predicting MA addicts may directly lead to improved treatment outcomes. In the current study, we applied the support vector machine (SVM)-based classification method to resting-state functional magnetic resonance imaging (rs-fMRI) data obtained from individuals with methamphetamine use disorder (MUD) and healthy controls (HCs) to identify brain-based features predictive of MUD. Brain connectivity analyses were conducted for 36 individuals with MUD as well as 37 HCs based on the brainnetome atlas, and the neighborhood component analysis was applied for feature selection. Eighteen most relevant features were screened out and fed into the SVM to classify the data. The classifier was able to differentiate individuals with MUD from HCs with a high prediction accuracy, sensitivity, specificity, and AUC of 88.00, 86.84, 89.19, and 0.94, respectively. The top six discriminative features associated with changes in the functional activity of key nodes in the default mode network (DMN), all the remaining discriminative features are related to the thalamic connections within the cortico-striato-thalamo-cortical (CSTC) loop. In addition, the functional connectivity (FC) between the bilateral inferior parietal lobule (IPL) and right cingulate gyrus (CG) was significantly correlated with the duration of methamphetamine use. The results of this study not only indicated that MUD-related FC alterations were predictive of group membership, but also suggested that machine learning techniques could be used for the identification of MUD-related imaging biomarkers. Frontiers Media S.A. 2022-09-27 /pmc/articles/PMC9550874/ /pubmed/36238830 http://dx.doi.org/10.3389/fncel.2022.958437 Text en Copyright © 2022 Zhou, Tang, Sun, Yang, Ma, Wu, Chen, Wang, Hao, Wang, Li, Liu and Liao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cellular Neuroscience Zhou, Yanan Tang, Jingsong Sun, Yunkai Yang, Winson Fu Zun Ma, Yuejiao Wu, Qiuxia Chen, Shubao Wang, Qianjin Hao, Yuzhu Wang, Yunfei Li, Manyun Liu, Tieqiao Liao, Yanhui A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data |
title | A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data |
title_full | A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data |
title_fullStr | A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data |
title_full_unstemmed | A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data |
title_short | A brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional MRI data |
title_sort | brainnetome atlas-based methamphetamine dependence identification using neighborhood component analysis and machine learning on functional mri data |
topic | Cellular Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9550874/ https://www.ncbi.nlm.nih.gov/pubmed/36238830 http://dx.doi.org/10.3389/fncel.2022.958437 |
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