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The Halogen Bonding Proclivity of the sp(3) Sulfur Atom as a Halogen Bond Acceptor in Cocrystals of Tetrahydro-4H-thiopyran-4-one and Its Derivatives

[Image: see text] In this work, we present a systematic study of the capability of the sp(3) hybridized sulfur atom for halogen bonding both in a small building block, tetrahydro-4H-thiopyran-4-one, and two larger ones derived from it, Schiff bases with a morpholine fragment on the other end of the...

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Autores principales: Nemec, Vinko, Cinčić, Dominik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9553023/
https://www.ncbi.nlm.nih.gov/pubmed/36248237
http://dx.doi.org/10.1021/acs.cgd.2c00793
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author Nemec, Vinko
Cinčić, Dominik
author_facet Nemec, Vinko
Cinčić, Dominik
author_sort Nemec, Vinko
collection PubMed
description [Image: see text] In this work, we present a systematic study of the capability of the sp(3) hybridized sulfur atom for halogen bonding both in a small building block, tetrahydro-4H-thiopyran-4-one, and two larger ones derived from it, Schiff bases with a morpholine fragment on the other end of the molecule. These three building blocks were cocrystallized with six perhalogenated aromates: 1,4-diiodotetrafluorobenzene, 1,3,5-triiodotrifluorobenzene, 1,3-diiodotetrafluorobenzene, 1,2-diiodotetrafluorobenzene, iodopentafluorobenzene, and 1,4-dibromotetrafluorobenzene. Out of the 18 combinations, only 7 (39%) yielded cocrystals, although with a high occurrence of the targeted I···S halogen bonding motif in all cocrystals (71%), and in imine cocrystals the I···O(morpholine) motif (100%) as well as, surprisingly, the I···N(imine) motif (100%). The I···S halogen bonds presented in this work feature lower relative shortening values than those for other types of sulfur atoms; however, the sp(3) sulfur atom could potentially be more specific an acceptor for halogen bonding.
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spelling pubmed-95530232022-10-12 The Halogen Bonding Proclivity of the sp(3) Sulfur Atom as a Halogen Bond Acceptor in Cocrystals of Tetrahydro-4H-thiopyran-4-one and Its Derivatives Nemec, Vinko Cinčić, Dominik Cryst Growth Des [Image: see text] In this work, we present a systematic study of the capability of the sp(3) hybridized sulfur atom for halogen bonding both in a small building block, tetrahydro-4H-thiopyran-4-one, and two larger ones derived from it, Schiff bases with a morpholine fragment on the other end of the molecule. These three building blocks were cocrystallized with six perhalogenated aromates: 1,4-diiodotetrafluorobenzene, 1,3,5-triiodotrifluorobenzene, 1,3-diiodotetrafluorobenzene, 1,2-diiodotetrafluorobenzene, iodopentafluorobenzene, and 1,4-dibromotetrafluorobenzene. Out of the 18 combinations, only 7 (39%) yielded cocrystals, although with a high occurrence of the targeted I···S halogen bonding motif in all cocrystals (71%), and in imine cocrystals the I···O(morpholine) motif (100%) as well as, surprisingly, the I···N(imine) motif (100%). The I···S halogen bonds presented in this work feature lower relative shortening values than those for other types of sulfur atoms; however, the sp(3) sulfur atom could potentially be more specific an acceptor for halogen bonding. American Chemical Society 2022-09-13 2022-10-05 /pmc/articles/PMC9553023/ /pubmed/36248237 http://dx.doi.org/10.1021/acs.cgd.2c00793 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Nemec, Vinko
Cinčić, Dominik
The Halogen Bonding Proclivity of the sp(3) Sulfur Atom as a Halogen Bond Acceptor in Cocrystals of Tetrahydro-4H-thiopyran-4-one and Its Derivatives
title The Halogen Bonding Proclivity of the sp(3) Sulfur Atom as a Halogen Bond Acceptor in Cocrystals of Tetrahydro-4H-thiopyran-4-one and Its Derivatives
title_full The Halogen Bonding Proclivity of the sp(3) Sulfur Atom as a Halogen Bond Acceptor in Cocrystals of Tetrahydro-4H-thiopyran-4-one and Its Derivatives
title_fullStr The Halogen Bonding Proclivity of the sp(3) Sulfur Atom as a Halogen Bond Acceptor in Cocrystals of Tetrahydro-4H-thiopyran-4-one and Its Derivatives
title_full_unstemmed The Halogen Bonding Proclivity of the sp(3) Sulfur Atom as a Halogen Bond Acceptor in Cocrystals of Tetrahydro-4H-thiopyran-4-one and Its Derivatives
title_short The Halogen Bonding Proclivity of the sp(3) Sulfur Atom as a Halogen Bond Acceptor in Cocrystals of Tetrahydro-4H-thiopyran-4-one and Its Derivatives
title_sort halogen bonding proclivity of the sp(3) sulfur atom as a halogen bond acceptor in cocrystals of tetrahydro-4h-thiopyran-4-one and its derivatives
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9553023/
https://www.ncbi.nlm.nih.gov/pubmed/36248237
http://dx.doi.org/10.1021/acs.cgd.2c00793
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