Cargando…
Diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels
BACKGROUND: We aimed to assess the differences in the gut microbiome among participants with different uric acid levels (hyperuricemia [HUA] patients, low serum uric acid [LSU] patients, and controls with normal levels) and to develop a model to predict HUA based on microbial biomarkers. METHODS: We...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9553226/ https://www.ncbi.nlm.nih.gov/pubmed/36237183 http://dx.doi.org/10.3389/fendo.2022.925119 |
_version_ | 1784806421196439552 |
---|---|
author | Liang, Meiting Liu, Jingkun Chen, Wujin He, Yi Kahaer, Mayina Li, Rui Tian, Tingting Liu, Yezhou Bai, Bing Cui, Yuena Yang, Shanshan Xiong, Wenjuan Ma, Yan Zhang, Bei Sun, Yuping |
author_facet | Liang, Meiting Liu, Jingkun Chen, Wujin He, Yi Kahaer, Mayina Li, Rui Tian, Tingting Liu, Yezhou Bai, Bing Cui, Yuena Yang, Shanshan Xiong, Wenjuan Ma, Yan Zhang, Bei Sun, Yuping |
author_sort | Liang, Meiting |
collection | PubMed |
description | BACKGROUND: We aimed to assess the differences in the gut microbiome among participants with different uric acid levels (hyperuricemia [HUA] patients, low serum uric acid [LSU] patients, and controls with normal levels) and to develop a model to predict HUA based on microbial biomarkers. METHODS: We sequenced the V3-V4 variable region of the 16S rDNA gene in 168 fecal samples from HUA patients (n=50), LSU patients (n=61), and controls (n=57). We then analyzed the differences in the gut microbiome between these groups. To identify gut microbial biomarkers, the 107 HUA patients and controls were randomly divided (2:1) into development and validation groups and 10-fold cross-validation of a random forest model was performed. We then established three diagnostic models: a clinical model, microbial biomarker model, and combined model. RESULTS: The gut microbial α diversity, in terms of the Shannon and Simpson indices, was decreased in LSU and HUA patients compared to controls, but only the decreases in the HUA group were significant (P=0.0029 and P=0.013, respectively). The phylum Proteobacteria (P<0.001) and genus Bacteroides (P=0.02) were significantly increased in HUA patients compared to controls, while the genus Ruminococcaceae_Ruminococcus was decreased (P=0.02). Twelve microbial biomarkers were identified. The area under the curve (AUC) for these biomarkers in the development group was 84.9% (P<0.001). Notably, an AUC of 89.1% (P<0.001) was achieved by combining the microbial biomarkers and clinical factors. CONCLUSIONS: The combined model is a reliable tool for predicting HUA and could be used to assist in the clinical evaluation of patients and prevention of HUA. |
format | Online Article Text |
id | pubmed-9553226 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95532262022-10-12 Diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels Liang, Meiting Liu, Jingkun Chen, Wujin He, Yi Kahaer, Mayina Li, Rui Tian, Tingting Liu, Yezhou Bai, Bing Cui, Yuena Yang, Shanshan Xiong, Wenjuan Ma, Yan Zhang, Bei Sun, Yuping Front Endocrinol (Lausanne) Endocrinology BACKGROUND: We aimed to assess the differences in the gut microbiome among participants with different uric acid levels (hyperuricemia [HUA] patients, low serum uric acid [LSU] patients, and controls with normal levels) and to develop a model to predict HUA based on microbial biomarkers. METHODS: We sequenced the V3-V4 variable region of the 16S rDNA gene in 168 fecal samples from HUA patients (n=50), LSU patients (n=61), and controls (n=57). We then analyzed the differences in the gut microbiome between these groups. To identify gut microbial biomarkers, the 107 HUA patients and controls were randomly divided (2:1) into development and validation groups and 10-fold cross-validation of a random forest model was performed. We then established three diagnostic models: a clinical model, microbial biomarker model, and combined model. RESULTS: The gut microbial α diversity, in terms of the Shannon and Simpson indices, was decreased in LSU and HUA patients compared to controls, but only the decreases in the HUA group were significant (P=0.0029 and P=0.013, respectively). The phylum Proteobacteria (P<0.001) and genus Bacteroides (P=0.02) were significantly increased in HUA patients compared to controls, while the genus Ruminococcaceae_Ruminococcus was decreased (P=0.02). Twelve microbial biomarkers were identified. The area under the curve (AUC) for these biomarkers in the development group was 84.9% (P<0.001). Notably, an AUC of 89.1% (P<0.001) was achieved by combining the microbial biomarkers and clinical factors. CONCLUSIONS: The combined model is a reliable tool for predicting HUA and could be used to assist in the clinical evaluation of patients and prevention of HUA. Frontiers Media S.A. 2022-09-27 /pmc/articles/PMC9553226/ /pubmed/36237183 http://dx.doi.org/10.3389/fendo.2022.925119 Text en Copyright © 2022 Liang, Liu, Chen, He, Kahaer, Li, Tian, Liu, Bai, Cui, Yang, Xiong, Ma, Zhang and Sun https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Endocrinology Liang, Meiting Liu, Jingkun Chen, Wujin He, Yi Kahaer, Mayina Li, Rui Tian, Tingting Liu, Yezhou Bai, Bing Cui, Yuena Yang, Shanshan Xiong, Wenjuan Ma, Yan Zhang, Bei Sun, Yuping Diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels |
title | Diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels |
title_full | Diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels |
title_fullStr | Diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels |
title_full_unstemmed | Diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels |
title_short | Diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels |
title_sort | diagnostic model for predicting hyperuricemia based on alterations of the gut microbiome in individuals with different serum uric acid levels |
topic | Endocrinology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9553226/ https://www.ncbi.nlm.nih.gov/pubmed/36237183 http://dx.doi.org/10.3389/fendo.2022.925119 |
work_keys_str_mv | AT liangmeiting diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT liujingkun diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT chenwujin diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT heyi diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT kahaermayina diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT lirui diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT tiantingting diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT liuyezhou diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT baibing diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT cuiyuena diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT yangshanshan diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT xiongwenjuan diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT mayan diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT zhangbei diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels AT sunyuping diagnosticmodelforpredictinghyperuricemiabasedonalterationsofthegutmicrobiomeinindividualswithdifferentserumuricacidlevels |