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Regional and temporal differences in the relation between SARS-CoV-2 biomarkers in wastewater and estimated infection prevalence – Insights from long-term surveillance

Wastewater-based epidemiology provides a conceptual framework for the evaluation of the prevalence of public health related biomarkers. In the context of the Coronavirus disease-2019, wastewater monitoring emerged as a complementary tool for epidemic management. In this study, we evaluated data from...

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Autores principales: Helm, Björn, Geissler, Michael, Mayer, Robin, Schubert, Sara, Oertel, Reinhard, Dumke, Roger, Dalpke, Alexander, El-Armouche, Ali, Renner, Bertold, Krebs, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier B.V. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9554318/
https://www.ncbi.nlm.nih.gov/pubmed/36240928
http://dx.doi.org/10.1016/j.scitotenv.2022.159358
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author Helm, Björn
Geissler, Michael
Mayer, Robin
Schubert, Sara
Oertel, Reinhard
Dumke, Roger
Dalpke, Alexander
El-Armouche, Ali
Renner, Bertold
Krebs, Peter
author_facet Helm, Björn
Geissler, Michael
Mayer, Robin
Schubert, Sara
Oertel, Reinhard
Dumke, Roger
Dalpke, Alexander
El-Armouche, Ali
Renner, Bertold
Krebs, Peter
author_sort Helm, Björn
collection PubMed
description Wastewater-based epidemiology provides a conceptual framework for the evaluation of the prevalence of public health related biomarkers. In the context of the Coronavirus disease-2019, wastewater monitoring emerged as a complementary tool for epidemic management. In this study, we evaluated data from six wastewater treatment plants in the region of Saxony, Germany. The study period lasted from February to December 2021 and covered the third and fourth regional epidemic waves. We collected 1065 daily composite samples and analyzed SARS-CoV-2 RNA concentrations using reverse transcription-quantitative polymerase chain reaction (RT-qPCR). Regression models quantify the relation between RNA concentrations and disease prevalence. We demonstrated that the relation is site and time specific. Median loads per diagnosed case differed by a factor of 3–4 among sites during both waves and were on average 45 % higher during the third wave. In most cases, log-log-transformed data achieved better regression performance than non-transformed data and local calibration outperformed global models for all sites. The inclusion of lag/lead time, discharge and detection probability improved model performance in all cases significantly, but the importance of these components was also site and time specific. In all cases, models with lag/lead time and log-log-transformed data obtained satisfactory goodness-of-fit with adjusted coefficients of determination higher than 0.5. Back-estimation of testing efficiency from wastewater data confirmed state-wide prevalence estimation from individual testing statistics, but revealed pronounced differences throughout the epidemic waves and among the different sites.
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spelling pubmed-95543182022-10-12 Regional and temporal differences in the relation between SARS-CoV-2 biomarkers in wastewater and estimated infection prevalence – Insights from long-term surveillance Helm, Björn Geissler, Michael Mayer, Robin Schubert, Sara Oertel, Reinhard Dumke, Roger Dalpke, Alexander El-Armouche, Ali Renner, Bertold Krebs, Peter Sci Total Environ Article Wastewater-based epidemiology provides a conceptual framework for the evaluation of the prevalence of public health related biomarkers. In the context of the Coronavirus disease-2019, wastewater monitoring emerged as a complementary tool for epidemic management. In this study, we evaluated data from six wastewater treatment plants in the region of Saxony, Germany. The study period lasted from February to December 2021 and covered the third and fourth regional epidemic waves. We collected 1065 daily composite samples and analyzed SARS-CoV-2 RNA concentrations using reverse transcription-quantitative polymerase chain reaction (RT-qPCR). Regression models quantify the relation between RNA concentrations and disease prevalence. We demonstrated that the relation is site and time specific. Median loads per diagnosed case differed by a factor of 3–4 among sites during both waves and were on average 45 % higher during the third wave. In most cases, log-log-transformed data achieved better regression performance than non-transformed data and local calibration outperformed global models for all sites. The inclusion of lag/lead time, discharge and detection probability improved model performance in all cases significantly, but the importance of these components was also site and time specific. In all cases, models with lag/lead time and log-log-transformed data obtained satisfactory goodness-of-fit with adjusted coefficients of determination higher than 0.5. Back-estimation of testing efficiency from wastewater data confirmed state-wide prevalence estimation from individual testing statistics, but revealed pronounced differences throughout the epidemic waves and among the different sites. The Authors. Published by Elsevier B.V. 2023-01-20 2022-10-12 /pmc/articles/PMC9554318/ /pubmed/36240928 http://dx.doi.org/10.1016/j.scitotenv.2022.159358 Text en © 2022 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Helm, Björn
Geissler, Michael
Mayer, Robin
Schubert, Sara
Oertel, Reinhard
Dumke, Roger
Dalpke, Alexander
El-Armouche, Ali
Renner, Bertold
Krebs, Peter
Regional and temporal differences in the relation between SARS-CoV-2 biomarkers in wastewater and estimated infection prevalence – Insights from long-term surveillance
title Regional and temporal differences in the relation between SARS-CoV-2 biomarkers in wastewater and estimated infection prevalence – Insights from long-term surveillance
title_full Regional and temporal differences in the relation between SARS-CoV-2 biomarkers in wastewater and estimated infection prevalence – Insights from long-term surveillance
title_fullStr Regional and temporal differences in the relation between SARS-CoV-2 biomarkers in wastewater and estimated infection prevalence – Insights from long-term surveillance
title_full_unstemmed Regional and temporal differences in the relation between SARS-CoV-2 biomarkers in wastewater and estimated infection prevalence – Insights from long-term surveillance
title_short Regional and temporal differences in the relation between SARS-CoV-2 biomarkers in wastewater and estimated infection prevalence – Insights from long-term surveillance
title_sort regional and temporal differences in the relation between sars-cov-2 biomarkers in wastewater and estimated infection prevalence – insights from long-term surveillance
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9554318/
https://www.ncbi.nlm.nih.gov/pubmed/36240928
http://dx.doi.org/10.1016/j.scitotenv.2022.159358
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