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Evaluating the use of synthetic T1-w images in new T2 lesion detection in multiple sclerosis
The assessment of disease activity using serial brain MRI scans is one of the most valuable strategies for monitoring treatment response in patients with multiple sclerosis (MS) receiving disease-modifying treatments. Recently, several deep learning approaches have been proposed to improve this anal...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9558286/ https://www.ncbi.nlm.nih.gov/pubmed/36248650 http://dx.doi.org/10.3389/fnins.2022.954662 |
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author | Valencia, Liliana Clèrigues, Albert Valverde, Sergi Salem, Mostafa Oliver, Arnau Rovira, Àlex Lladó, Xavier |
author_facet | Valencia, Liliana Clèrigues, Albert Valverde, Sergi Salem, Mostafa Oliver, Arnau Rovira, Àlex Lladó, Xavier |
author_sort | Valencia, Liliana |
collection | PubMed |
description | The assessment of disease activity using serial brain MRI scans is one of the most valuable strategies for monitoring treatment response in patients with multiple sclerosis (MS) receiving disease-modifying treatments. Recently, several deep learning approaches have been proposed to improve this analysis, obtaining a good trade-off between sensitivity and specificity, especially when using T1-w and T2-FLAIR images as inputs. However, the need to acquire two different types of images is time-consuming, costly and not always available in clinical practice. In this paper, we investigate an approach to generate synthetic T1-w images from T2-FLAIR images and subsequently analyse the impact of using original and synthetic T1-w images on the performance of a state-of-the-art approach for longitudinal MS lesion detection. We evaluate our approach on a dataset containing 136 images from MS patients, and 73 images with lesion activity (the appearance of new T2 lesions in follow-up scans). To evaluate the synthesis of the images, we analyse the structural similarity index metric and the median absolute error and obtain consistent results. To study the impact of synthetic T1-w images, we evaluate the performance of the new lesion detection approach when using (1) both T2-FLAIR and T1-w original images, (2) only T2-FLAIR images, and (3) both T2-FLAIR and synthetic T1-w images. Sensitivities of 0.75, 0.63, and 0.81, respectively, were obtained at the same false-positive rate (0.14) for all experiments. In addition, we also present the results obtained when using the data from the international MSSEG-2 challenge, showing also an improvement when including synthetic T1-w images. In conclusion, we show that the use of synthetic images can support the lack of data or even be used instead of the original image to homogenize the contrast of the different acquisitions in new T2 lesions detection algorithms. |
format | Online Article Text |
id | pubmed-9558286 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95582862022-10-14 Evaluating the use of synthetic T1-w images in new T2 lesion detection in multiple sclerosis Valencia, Liliana Clèrigues, Albert Valverde, Sergi Salem, Mostafa Oliver, Arnau Rovira, Àlex Lladó, Xavier Front Neurosci Neuroscience The assessment of disease activity using serial brain MRI scans is one of the most valuable strategies for monitoring treatment response in patients with multiple sclerosis (MS) receiving disease-modifying treatments. Recently, several deep learning approaches have been proposed to improve this analysis, obtaining a good trade-off between sensitivity and specificity, especially when using T1-w and T2-FLAIR images as inputs. However, the need to acquire two different types of images is time-consuming, costly and not always available in clinical practice. In this paper, we investigate an approach to generate synthetic T1-w images from T2-FLAIR images and subsequently analyse the impact of using original and synthetic T1-w images on the performance of a state-of-the-art approach for longitudinal MS lesion detection. We evaluate our approach on a dataset containing 136 images from MS patients, and 73 images with lesion activity (the appearance of new T2 lesions in follow-up scans). To evaluate the synthesis of the images, we analyse the structural similarity index metric and the median absolute error and obtain consistent results. To study the impact of synthetic T1-w images, we evaluate the performance of the new lesion detection approach when using (1) both T2-FLAIR and T1-w original images, (2) only T2-FLAIR images, and (3) both T2-FLAIR and synthetic T1-w images. Sensitivities of 0.75, 0.63, and 0.81, respectively, were obtained at the same false-positive rate (0.14) for all experiments. In addition, we also present the results obtained when using the data from the international MSSEG-2 challenge, showing also an improvement when including synthetic T1-w images. In conclusion, we show that the use of synthetic images can support the lack of data or even be used instead of the original image to homogenize the contrast of the different acquisitions in new T2 lesions detection algorithms. Frontiers Media S.A. 2022-09-29 /pmc/articles/PMC9558286/ /pubmed/36248650 http://dx.doi.org/10.3389/fnins.2022.954662 Text en Copyright © 2022 Valencia, Clèrigues, Valverde, Salem, Oliver, Rovira and Lladó. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Valencia, Liliana Clèrigues, Albert Valverde, Sergi Salem, Mostafa Oliver, Arnau Rovira, Àlex Lladó, Xavier Evaluating the use of synthetic T1-w images in new T2 lesion detection in multiple sclerosis |
title | Evaluating the use of synthetic T1-w images in new T2 lesion detection in multiple sclerosis |
title_full | Evaluating the use of synthetic T1-w images in new T2 lesion detection in multiple sclerosis |
title_fullStr | Evaluating the use of synthetic T1-w images in new T2 lesion detection in multiple sclerosis |
title_full_unstemmed | Evaluating the use of synthetic T1-w images in new T2 lesion detection in multiple sclerosis |
title_short | Evaluating the use of synthetic T1-w images in new T2 lesion detection in multiple sclerosis |
title_sort | evaluating the use of synthetic t1-w images in new t2 lesion detection in multiple sclerosis |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9558286/ https://www.ncbi.nlm.nih.gov/pubmed/36248650 http://dx.doi.org/10.3389/fnins.2022.954662 |
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