The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China

Rhododendron shanii W.P. Fang 1983 (Ericaceae) is woody plant naturally distributed in the southwest of Anhui, China. The complete chloroplast genome sequence of R. shanii was generated by whole-genome next-generation sequencing data and assembled based on three Rhododendron species chloroplast geno...

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Autores principales: Yu, Huan-Xi, Xu, Wang-Gu, Zhang, Jian-Liang, Lv, Ying-Ying, Chen, Peng, Xu, Bao-Kun, Qu, Chang, Wang, Zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9559044/
https://www.ncbi.nlm.nih.gov/pubmed/36245812
http://dx.doi.org/10.1080/23802359.2022.2127336
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author Yu, Huan-Xi
Xu, Wang-Gu
Zhang, Jian-Liang
Lv, Ying-Ying
Chen, Peng
Xu, Bao-Kun
Qu, Chang
Wang, Zhi
author_facet Yu, Huan-Xi
Xu, Wang-Gu
Zhang, Jian-Liang
Lv, Ying-Ying
Chen, Peng
Xu, Bao-Kun
Qu, Chang
Wang, Zhi
author_sort Yu, Huan-Xi
collection PubMed
description Rhododendron shanii W.P. Fang 1983 (Ericaceae) is woody plant naturally distributed in the southwest of Anhui, China. The complete chloroplast genome sequence of R. shanii was generated by whole-genome next-generation sequencing data and assembled based on three Rhododendron species chloroplast genome. The complete chloroplast genome sequence of R. shanii was 204,170 bp and divided into four distinct regions: small single-copy region (2615 bp), large single-copy region (107,189 bp), and a pair of inverted repeat regions (47,183 bp). The genome annotation displayed 150 genes, including 95 protein-coding genes, 47 tRNA genes, and eight rRNA genes. Phylogenetic analysis with the Ericaceae reported chloroplast genomes revealed that R. shanii is sister to the clade comprising R. delavayi, R. griersonianum and R. platypodum.
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spelling pubmed-95590442022-10-14 The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China Yu, Huan-Xi Xu, Wang-Gu Zhang, Jian-Liang Lv, Ying-Ying Chen, Peng Xu, Bao-Kun Qu, Chang Wang, Zhi Mitochondrial DNA B Resour Plastome Announcement Rhododendron shanii W.P. Fang 1983 (Ericaceae) is woody plant naturally distributed in the southwest of Anhui, China. The complete chloroplast genome sequence of R. shanii was generated by whole-genome next-generation sequencing data and assembled based on three Rhododendron species chloroplast genome. The complete chloroplast genome sequence of R. shanii was 204,170 bp and divided into four distinct regions: small single-copy region (2615 bp), large single-copy region (107,189 bp), and a pair of inverted repeat regions (47,183 bp). The genome annotation displayed 150 genes, including 95 protein-coding genes, 47 tRNA genes, and eight rRNA genes. Phylogenetic analysis with the Ericaceae reported chloroplast genomes revealed that R. shanii is sister to the clade comprising R. delavayi, R. griersonianum and R. platypodum. Taylor & Francis 2022-10-11 /pmc/articles/PMC9559044/ /pubmed/36245812 http://dx.doi.org/10.1080/23802359.2022.2127336 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Yu, Huan-Xi
Xu, Wang-Gu
Zhang, Jian-Liang
Lv, Ying-Ying
Chen, Peng
Xu, Bao-Kun
Qu, Chang
Wang, Zhi
The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China
title The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China
title_full The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China
title_fullStr The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China
title_full_unstemmed The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China
title_short The complete chloroplast genome of Rhododendron shanii W.P. Fang (Ericaceae), a endemic plant from the Southern Dabie Mountains of China
title_sort complete chloroplast genome of rhododendron shanii w.p. fang (ericaceae), a endemic plant from the southern dabie mountains of china
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9559044/
https://www.ncbi.nlm.nih.gov/pubmed/36245812
http://dx.doi.org/10.1080/23802359.2022.2127336
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