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The Korea Cohort Consortium: The Future of Pooling Cohort Studies

OBJECTIVES: We introduced the cohort studies included in the Korean Cohort Consortium (KCC), focusing on large-scale cohort studies established in Korea with a prolonged follow-up period. Moreover, we also provided projections of the follow-up and estimates of the sample size that would be necessary...

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Autores principales: Lee, Sangjun, Ko, Kwang-Pil, Lee, Jung Eun, Kim, Inah, Jee, Sun Ha, Shin, Aesun, Kweon, Sun-Seog, Shin, Min-Ho, Park, Sangmin, Ryu, Seungho, Yang, Sun Young, Choi, Seung Ho, Kim, Jeongseon, Yi, Sang-Wook, Kang, Daehee, Yoo, Keun-Young, Park, Sue K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society for Preventive Medicine 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9561144/
https://www.ncbi.nlm.nih.gov/pubmed/36229909
http://dx.doi.org/10.3961/jpmph.22.299
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author Lee, Sangjun
Ko, Kwang-Pil
Lee, Jung Eun
Kim, Inah
Jee, Sun Ha
Shin, Aesun
Kweon, Sun-Seog
Shin, Min-Ho
Park, Sangmin
Ryu, Seungho
Yang, Sun Young
Choi, Seung Ho
Kim, Jeongseon
Yi, Sang-Wook
Kang, Daehee
Yoo, Keun-Young
Park, Sue K.
author_facet Lee, Sangjun
Ko, Kwang-Pil
Lee, Jung Eun
Kim, Inah
Jee, Sun Ha
Shin, Aesun
Kweon, Sun-Seog
Shin, Min-Ho
Park, Sangmin
Ryu, Seungho
Yang, Sun Young
Choi, Seung Ho
Kim, Jeongseon
Yi, Sang-Wook
Kang, Daehee
Yoo, Keun-Young
Park, Sue K.
author_sort Lee, Sangjun
collection PubMed
description OBJECTIVES: We introduced the cohort studies included in the Korean Cohort Consortium (KCC), focusing on large-scale cohort studies established in Korea with a prolonged follow-up period. Moreover, we also provided projections of the follow-up and estimates of the sample size that would be necessary for big-data analyses based on pooling established cohort studies, including population-based genomic studies. METHODS: We mainly focused on the characteristics of individual cohort studies from the KCC. We developed “PROFAN”, a Shiny application for projecting the follow-up period to achieve a certain number of cases when pooling established cohort studies. As examples, we projected the follow-up periods for 5000 cases of gastric cancer, 2500 cases of prostate and breast cancer, and 500 cases of non-Hodgkin lymphoma. The sample sizes for sequencing-based analyses based on a 1:1 case-control study were also calculated. RESULTS: The KCC consisted of 8 individual cohort studies, of which 3 were community-based and 5 were health screening-based cohorts. The population-based cohort studies were mainly organized by Korean government agencies and research institutes. The projected follow-up period was at least 10 years to achieve 5000 cases based on a cohort of 0.5 million participants. The mean of the minimum to maximum sample sizes for performing sequencing analyses was 5917–72 102. CONCLUSIONS: We propose an approach to establish a large-scale consortium based on the standardization and harmonization of existing cohort studies to obtain adequate statistical power with a sufficient sample size to analyze high-risk groups or rare cancer subtypes.
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spelling pubmed-95611442022-10-19 The Korea Cohort Consortium: The Future of Pooling Cohort Studies Lee, Sangjun Ko, Kwang-Pil Lee, Jung Eun Kim, Inah Jee, Sun Ha Shin, Aesun Kweon, Sun-Seog Shin, Min-Ho Park, Sangmin Ryu, Seungho Yang, Sun Young Choi, Seung Ho Kim, Jeongseon Yi, Sang-Wook Kang, Daehee Yoo, Keun-Young Park, Sue K. J Prev Med Public Health Original Article OBJECTIVES: We introduced the cohort studies included in the Korean Cohort Consortium (KCC), focusing on large-scale cohort studies established in Korea with a prolonged follow-up period. Moreover, we also provided projections of the follow-up and estimates of the sample size that would be necessary for big-data analyses based on pooling established cohort studies, including population-based genomic studies. METHODS: We mainly focused on the characteristics of individual cohort studies from the KCC. We developed “PROFAN”, a Shiny application for projecting the follow-up period to achieve a certain number of cases when pooling established cohort studies. As examples, we projected the follow-up periods for 5000 cases of gastric cancer, 2500 cases of prostate and breast cancer, and 500 cases of non-Hodgkin lymphoma. The sample sizes for sequencing-based analyses based on a 1:1 case-control study were also calculated. RESULTS: The KCC consisted of 8 individual cohort studies, of which 3 were community-based and 5 were health screening-based cohorts. The population-based cohort studies were mainly organized by Korean government agencies and research institutes. The projected follow-up period was at least 10 years to achieve 5000 cases based on a cohort of 0.5 million participants. The mean of the minimum to maximum sample sizes for performing sequencing analyses was 5917–72 102. CONCLUSIONS: We propose an approach to establish a large-scale consortium based on the standardization and harmonization of existing cohort studies to obtain adequate statistical power with a sufficient sample size to analyze high-risk groups or rare cancer subtypes. Korean Society for Preventive Medicine 2022-09 2022-09-12 /pmc/articles/PMC9561144/ /pubmed/36229909 http://dx.doi.org/10.3961/jpmph.22.299 Text en Copyright © 2022 The Korean Society for Preventive Medicine https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Lee, Sangjun
Ko, Kwang-Pil
Lee, Jung Eun
Kim, Inah
Jee, Sun Ha
Shin, Aesun
Kweon, Sun-Seog
Shin, Min-Ho
Park, Sangmin
Ryu, Seungho
Yang, Sun Young
Choi, Seung Ho
Kim, Jeongseon
Yi, Sang-Wook
Kang, Daehee
Yoo, Keun-Young
Park, Sue K.
The Korea Cohort Consortium: The Future of Pooling Cohort Studies
title The Korea Cohort Consortium: The Future of Pooling Cohort Studies
title_full The Korea Cohort Consortium: The Future of Pooling Cohort Studies
title_fullStr The Korea Cohort Consortium: The Future of Pooling Cohort Studies
title_full_unstemmed The Korea Cohort Consortium: The Future of Pooling Cohort Studies
title_short The Korea Cohort Consortium: The Future of Pooling Cohort Studies
title_sort korea cohort consortium: the future of pooling cohort studies
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9561144/
https://www.ncbi.nlm.nih.gov/pubmed/36229909
http://dx.doi.org/10.3961/jpmph.22.299
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