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Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy
Cholangiocarcinoma (CCA) is highly prevalent in the northeastern region of Thailand. Current diagnostic methods for CCA are often expensive, time-consuming, and require medical professionals. Thus, there is a need for a simple and low-cost CCA screening method. This work developed a rapid label-free...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9562168/ https://www.ncbi.nlm.nih.gov/pubmed/36227878 http://dx.doi.org/10.1371/journal.pone.0275362 |
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author | Suksuratin, Peeraya Rodpai, Rutchanee Luvira, Vor Intapan, Pewpan M. Maleewong, Wanchai Chuchuen, Oranat |
author_facet | Suksuratin, Peeraya Rodpai, Rutchanee Luvira, Vor Intapan, Pewpan M. Maleewong, Wanchai Chuchuen, Oranat |
author_sort | Suksuratin, Peeraya |
collection | PubMed |
description | Cholangiocarcinoma (CCA) is highly prevalent in the northeastern region of Thailand. Current diagnostic methods for CCA are often expensive, time-consuming, and require medical professionals. Thus, there is a need for a simple and low-cost CCA screening method. This work developed a rapid label-free technique by Raman spectroscopy combined with the multivariate statistical methods of principal component analysis and linear discriminant analysis (PCA-LDA), aiming to analyze and classify between CCA (n = 30) and healthy (n = 30) serum specimens. The model’s classification performance was validated using k-fold cross validation (k = 5). Serum levels of cholesterol (548, 700 cm(-1)), tryptophan (878 cm(-1)), and amide III (1248,1265 cm(-1)) were found to be statistically significantly higher in the CCA patients, whereas serum beta-carotene (1158, 1524 cm(-1)) levels were significantly lower. The peak heights of these identified Raman marker bands were input into an LDA model, achieving a cross-validated diagnostic sensitivity and specificity of 71.33% and 90.00% in distinguishing the CCA from healthy specimens. The PCA-LDA technique provided a higher cross-validated sensitivity and specificity of 86.67% and 96.67%. To conclude, this work demonstrated the feasibility of using Raman spectroscopy combined with PCA-LDA as a helpful tool for cholangiocarcinoma serum-based screening. |
format | Online Article Text |
id | pubmed-9562168 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-95621682022-10-15 Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy Suksuratin, Peeraya Rodpai, Rutchanee Luvira, Vor Intapan, Pewpan M. Maleewong, Wanchai Chuchuen, Oranat PLoS One Research Article Cholangiocarcinoma (CCA) is highly prevalent in the northeastern region of Thailand. Current diagnostic methods for CCA are often expensive, time-consuming, and require medical professionals. Thus, there is a need for a simple and low-cost CCA screening method. This work developed a rapid label-free technique by Raman spectroscopy combined with the multivariate statistical methods of principal component analysis and linear discriminant analysis (PCA-LDA), aiming to analyze and classify between CCA (n = 30) and healthy (n = 30) serum specimens. The model’s classification performance was validated using k-fold cross validation (k = 5). Serum levels of cholesterol (548, 700 cm(-1)), tryptophan (878 cm(-1)), and amide III (1248,1265 cm(-1)) were found to be statistically significantly higher in the CCA patients, whereas serum beta-carotene (1158, 1524 cm(-1)) levels were significantly lower. The peak heights of these identified Raman marker bands were input into an LDA model, achieving a cross-validated diagnostic sensitivity and specificity of 71.33% and 90.00% in distinguishing the CCA from healthy specimens. The PCA-LDA technique provided a higher cross-validated sensitivity and specificity of 86.67% and 96.67%. To conclude, this work demonstrated the feasibility of using Raman spectroscopy combined with PCA-LDA as a helpful tool for cholangiocarcinoma serum-based screening. Public Library of Science 2022-10-13 /pmc/articles/PMC9562168/ /pubmed/36227878 http://dx.doi.org/10.1371/journal.pone.0275362 Text en © 2022 Suksuratin et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Suksuratin, Peeraya Rodpai, Rutchanee Luvira, Vor Intapan, Pewpan M. Maleewong, Wanchai Chuchuen, Oranat Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy |
title | Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy |
title_full | Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy |
title_fullStr | Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy |
title_full_unstemmed | Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy |
title_short | Rapid label-free detection of cholangiocarcinoma from human serum using Raman spectroscopy |
title_sort | rapid label-free detection of cholangiocarcinoma from human serum using raman spectroscopy |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9562168/ https://www.ncbi.nlm.nih.gov/pubmed/36227878 http://dx.doi.org/10.1371/journal.pone.0275362 |
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