Cargando…
COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma
Background: Glioma as the most frequently discovered tumor affecting the brain shows significant morbidity and fatality rates with unfavorable prognosis. There is an urgent need to find novel therapeutic targets to overcome the low chemotherapeutic efficacy of glioma. This research examined whether...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9562965/ https://www.ncbi.nlm.nih.gov/pubmed/36249824 http://dx.doi.org/10.3389/fphar.2022.974107 |
_version_ | 1784808296416280576 |
---|---|
author | Liu, Zongheng Peng, Long Sun, Yidan Lu, Zhichao Wu, Bing Wang, Weichen Zhang, Xiaomei Hao, Haiyan Gong, Peipei |
author_facet | Liu, Zongheng Peng, Long Sun, Yidan Lu, Zhichao Wu, Bing Wang, Weichen Zhang, Xiaomei Hao, Haiyan Gong, Peipei |
author_sort | Liu, Zongheng |
collection | PubMed |
description | Background: Glioma as the most frequently discovered tumor affecting the brain shows significant morbidity and fatality rates with unfavorable prognosis. There is an urgent need to find novel therapeutic targets to overcome the low chemotherapeutic efficacy of glioma. This research examined whether the copper-metabolism-domain protein, COMMD4, had predictive and therapeutic significance in glioma. Methods: Using the freely accessible CGGA (The Chinese Glioma Atlas) and TCGA (The Cancer Genome Atlas) databases, we examined the function of COMMD4 in GBM and LGG. CIBERSORT and TIMER were utilized to assess the associations between COMMD4 and immune cells. The Gene Set Enrichment Analysis (GSEA) was employed to examine the functional data. Furthermore, the link between COMMD4 expression and predicted treatment response was evaluated via CellMiner Cross-Database. Meanwhile, qRT-PCR was conducted to examine COMMD4 expression in human glioma. Finally, Migration and invasion of glioma cells (U-87, U-251) were assessed using transwell assays. R was used to analyze the statistical data. Results: According to our findings, COMMD4 expression level was higher in patients having grade-dependent glioma who also showed an unfavorable prognosis. Furthermore, qRT-PCR confirmed the high expression of COMMD4 in glioma tissues and cells. Additionally, using integrated correlation analysis, we acquired significant prognostic findings between isocitrate dehydrogenase 1(IDH1) and COMMD4. Meanwhile, a link between COMMD4 and many tumor-infiltrating immune cells was observed. GSEA and drug response analysis revealed the potential mechanism of COMMD4 in drug resistance of glioma. Conclusion: The current findings validated COMMD4 as a novel biological marker, which might offer insights into the possible drug resistance mechanisms and the impact of the immune microenvironment on glioma. COMMD4 might be used to predict glioma prognosis. |
format | Online Article Text |
id | pubmed-9562965 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95629652022-10-15 COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma Liu, Zongheng Peng, Long Sun, Yidan Lu, Zhichao Wu, Bing Wang, Weichen Zhang, Xiaomei Hao, Haiyan Gong, Peipei Front Pharmacol Pharmacology Background: Glioma as the most frequently discovered tumor affecting the brain shows significant morbidity and fatality rates with unfavorable prognosis. There is an urgent need to find novel therapeutic targets to overcome the low chemotherapeutic efficacy of glioma. This research examined whether the copper-metabolism-domain protein, COMMD4, had predictive and therapeutic significance in glioma. Methods: Using the freely accessible CGGA (The Chinese Glioma Atlas) and TCGA (The Cancer Genome Atlas) databases, we examined the function of COMMD4 in GBM and LGG. CIBERSORT and TIMER were utilized to assess the associations between COMMD4 and immune cells. The Gene Set Enrichment Analysis (GSEA) was employed to examine the functional data. Furthermore, the link between COMMD4 expression and predicted treatment response was evaluated via CellMiner Cross-Database. Meanwhile, qRT-PCR was conducted to examine COMMD4 expression in human glioma. Finally, Migration and invasion of glioma cells (U-87, U-251) were assessed using transwell assays. R was used to analyze the statistical data. Results: According to our findings, COMMD4 expression level was higher in patients having grade-dependent glioma who also showed an unfavorable prognosis. Furthermore, qRT-PCR confirmed the high expression of COMMD4 in glioma tissues and cells. Additionally, using integrated correlation analysis, we acquired significant prognostic findings between isocitrate dehydrogenase 1(IDH1) and COMMD4. Meanwhile, a link between COMMD4 and many tumor-infiltrating immune cells was observed. GSEA and drug response analysis revealed the potential mechanism of COMMD4 in drug resistance of glioma. Conclusion: The current findings validated COMMD4 as a novel biological marker, which might offer insights into the possible drug resistance mechanisms and the impact of the immune microenvironment on glioma. COMMD4 might be used to predict glioma prognosis. Frontiers Media S.A. 2022-09-30 /pmc/articles/PMC9562965/ /pubmed/36249824 http://dx.doi.org/10.3389/fphar.2022.974107 Text en Copyright © 2022 Liu, Peng, Sun, Lu, Wu, Wang, Zhang, Hao and Gong. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Pharmacology Liu, Zongheng Peng, Long Sun, Yidan Lu, Zhichao Wu, Bing Wang, Weichen Zhang, Xiaomei Hao, Haiyan Gong, Peipei COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma |
title | COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma |
title_full | COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma |
title_fullStr | COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma |
title_full_unstemmed | COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma |
title_short | COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma |
title_sort | commd4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma |
topic | Pharmacology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9562965/ https://www.ncbi.nlm.nih.gov/pubmed/36249824 http://dx.doi.org/10.3389/fphar.2022.974107 |
work_keys_str_mv | AT liuzongheng commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma AT penglong commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma AT sunyidan commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma AT luzhichao commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma AT wubing commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma AT wangweichen commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma AT zhangxiaomei commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma AT haohaiyan commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma AT gongpeipei commd4isanovelprognosticbiomarkerandrelatestopotentialdrugresistancemechanisminglioma |