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COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma

Background: Glioma as the most frequently discovered tumor affecting the brain shows significant morbidity and fatality rates with unfavorable prognosis. There is an urgent need to find novel therapeutic targets to overcome the low chemotherapeutic efficacy of glioma. This research examined whether...

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Autores principales: Liu, Zongheng, Peng, Long, Sun, Yidan, Lu, Zhichao, Wu, Bing, Wang, Weichen, Zhang, Xiaomei, Hao, Haiyan, Gong, Peipei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9562965/
https://www.ncbi.nlm.nih.gov/pubmed/36249824
http://dx.doi.org/10.3389/fphar.2022.974107
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author Liu, Zongheng
Peng, Long
Sun, Yidan
Lu, Zhichao
Wu, Bing
Wang, Weichen
Zhang, Xiaomei
Hao, Haiyan
Gong, Peipei
author_facet Liu, Zongheng
Peng, Long
Sun, Yidan
Lu, Zhichao
Wu, Bing
Wang, Weichen
Zhang, Xiaomei
Hao, Haiyan
Gong, Peipei
author_sort Liu, Zongheng
collection PubMed
description Background: Glioma as the most frequently discovered tumor affecting the brain shows significant morbidity and fatality rates with unfavorable prognosis. There is an urgent need to find novel therapeutic targets to overcome the low chemotherapeutic efficacy of glioma. This research examined whether the copper-metabolism-domain protein, COMMD4, had predictive and therapeutic significance in glioma. Methods: Using the freely accessible CGGA (The Chinese Glioma Atlas) and TCGA (The Cancer Genome Atlas) databases, we examined the function of COMMD4 in GBM and LGG. CIBERSORT and TIMER were utilized to assess the associations between COMMD4 and immune cells. The Gene Set Enrichment Analysis (GSEA) was employed to examine the functional data. Furthermore, the link between COMMD4 expression and predicted treatment response was evaluated via CellMiner Cross-Database. Meanwhile, qRT-PCR was conducted to examine COMMD4 expression in human glioma. Finally, Migration and invasion of glioma cells (U-87, U-251) were assessed using transwell assays. R was used to analyze the statistical data. Results: According to our findings, COMMD4 expression level was higher in patients having grade-dependent glioma who also showed an unfavorable prognosis. Furthermore, qRT-PCR confirmed the high expression of COMMD4 in glioma tissues and cells. Additionally, using integrated correlation analysis, we acquired significant prognostic findings between isocitrate dehydrogenase 1(IDH1) and COMMD4. Meanwhile, a link between COMMD4 and many tumor-infiltrating immune cells was observed. GSEA and drug response analysis revealed the potential mechanism of COMMD4 in drug resistance of glioma. Conclusion: The current findings validated COMMD4 as a novel biological marker, which might offer insights into the possible drug resistance mechanisms and the impact of the immune microenvironment on glioma. COMMD4 might be used to predict glioma prognosis.
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spelling pubmed-95629652022-10-15 COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma Liu, Zongheng Peng, Long Sun, Yidan Lu, Zhichao Wu, Bing Wang, Weichen Zhang, Xiaomei Hao, Haiyan Gong, Peipei Front Pharmacol Pharmacology Background: Glioma as the most frequently discovered tumor affecting the brain shows significant morbidity and fatality rates with unfavorable prognosis. There is an urgent need to find novel therapeutic targets to overcome the low chemotherapeutic efficacy of glioma. This research examined whether the copper-metabolism-domain protein, COMMD4, had predictive and therapeutic significance in glioma. Methods: Using the freely accessible CGGA (The Chinese Glioma Atlas) and TCGA (The Cancer Genome Atlas) databases, we examined the function of COMMD4 in GBM and LGG. CIBERSORT and TIMER were utilized to assess the associations between COMMD4 and immune cells. The Gene Set Enrichment Analysis (GSEA) was employed to examine the functional data. Furthermore, the link between COMMD4 expression and predicted treatment response was evaluated via CellMiner Cross-Database. Meanwhile, qRT-PCR was conducted to examine COMMD4 expression in human glioma. Finally, Migration and invasion of glioma cells (U-87, U-251) were assessed using transwell assays. R was used to analyze the statistical data. Results: According to our findings, COMMD4 expression level was higher in patients having grade-dependent glioma who also showed an unfavorable prognosis. Furthermore, qRT-PCR confirmed the high expression of COMMD4 in glioma tissues and cells. Additionally, using integrated correlation analysis, we acquired significant prognostic findings between isocitrate dehydrogenase 1(IDH1) and COMMD4. Meanwhile, a link between COMMD4 and many tumor-infiltrating immune cells was observed. GSEA and drug response analysis revealed the potential mechanism of COMMD4 in drug resistance of glioma. Conclusion: The current findings validated COMMD4 as a novel biological marker, which might offer insights into the possible drug resistance mechanisms and the impact of the immune microenvironment on glioma. COMMD4 might be used to predict glioma prognosis. Frontiers Media S.A. 2022-09-30 /pmc/articles/PMC9562965/ /pubmed/36249824 http://dx.doi.org/10.3389/fphar.2022.974107 Text en Copyright © 2022 Liu, Peng, Sun, Lu, Wu, Wang, Zhang, Hao and Gong. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pharmacology
Liu, Zongheng
Peng, Long
Sun, Yidan
Lu, Zhichao
Wu, Bing
Wang, Weichen
Zhang, Xiaomei
Hao, Haiyan
Gong, Peipei
COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma
title COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma
title_full COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma
title_fullStr COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma
title_full_unstemmed COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma
title_short COMMD4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma
title_sort commd4 is a novel prognostic biomarker and relates to potential drug resistance mechanism in glioma
topic Pharmacology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9562965/
https://www.ncbi.nlm.nih.gov/pubmed/36249824
http://dx.doi.org/10.3389/fphar.2022.974107
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