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NeuroBlu: a natural language processing (NLP) electronic health record (EHR) data analytic tool to generate real-world evidence in mental healthcare

INTRODUCTION: EHRs contain a rich source of real-world data that can support evidence generation to better understand mental disorders and improve treatment outcomes. However, EHR datasets are complex and include unstructured free text data that are time consuming to manually review and analyse. We...

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Autores principales: Patel, R., Wee, S.N., Ramaswamy, R., Thadani, S., Guruswamy, G., Garg, R., Calvanese, N., Valko, M., Rush, A., Rentería, M., Sarkar, J., Kollins, S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cambridge University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9563510/
http://dx.doi.org/10.1192/j.eurpsy.2022.286
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author Patel, R.
Wee, S.N.
Ramaswamy, R.
Thadani, S.
Guruswamy, G.
Garg, R.
Calvanese, N.
Valko, M.
Rush, A.
Rentería, M.
Sarkar, J.
Kollins, S.
author_facet Patel, R.
Wee, S.N.
Ramaswamy, R.
Thadani, S.
Guruswamy, G.
Garg, R.
Calvanese, N.
Valko, M.
Rush, A.
Rentería, M.
Sarkar, J.
Kollins, S.
author_sort Patel, R.
collection PubMed
description INTRODUCTION: EHRs contain a rich source of real-world data that can support evidence generation to better understand mental disorders and improve treatment outcomes. However, EHR datasets are complex and include unstructured free text data that are time consuming to manually review and analyse. We present NeuroBlu, a secure, cloud-based analytic tool that includes bespoke NLP software to enable users to analyse large volumes of EHR data to generate real-world evidence in mental healthcare. OBJECTIVES: (i) To assemble a large mental health EHR dataset in a secure, cloud-based environment. (ii) To apply NLP software to extract data on clinical features as part of the Mental State Examination (MSE). (iii) To analyse the distribution of NLP-derived MSE features by psychiatric diagnosis. METHODS: EHR data from 25 U.S. mental healthcare providers were de-identified and transformed into a common data model. NLP models were developed to extract 241 MSE features using a deep learning, long short-term memory (LSTM) approach. The NeuroBlu tool (https://www.neuroblu.ai/) was used to analyse the associations of MSE features in 543,849 patients. RESULTS: The figure below illustrates the percentage of patients in each diagnostic category with at least one recorded MSE feature. CONCLUSIONS: Delusions and hallucinations were more likely to be recorded in people with schizophrenia and schizoaffective disorder, and cognitive features were more likely to be recorded in people with dementia. However, mood symptoms were frequently recorded across all diagnoses illustrating their importance as a transdiagnostic clinical feature. NLP-derived clinical information could enhance the potential of EHR data to generate real-world evidence in mental healthcare. DISCLOSURE: This study was funded in full by Holmusk.
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spelling pubmed-95635102022-10-17 NeuroBlu: a natural language processing (NLP) electronic health record (EHR) data analytic tool to generate real-world evidence in mental healthcare Patel, R. Wee, S.N. Ramaswamy, R. Thadani, S. Guruswamy, G. Garg, R. Calvanese, N. Valko, M. Rush, A. Rentería, M. Sarkar, J. Kollins, S. Eur Psychiatry Abstract INTRODUCTION: EHRs contain a rich source of real-world data that can support evidence generation to better understand mental disorders and improve treatment outcomes. However, EHR datasets are complex and include unstructured free text data that are time consuming to manually review and analyse. We present NeuroBlu, a secure, cloud-based analytic tool that includes bespoke NLP software to enable users to analyse large volumes of EHR data to generate real-world evidence in mental healthcare. OBJECTIVES: (i) To assemble a large mental health EHR dataset in a secure, cloud-based environment. (ii) To apply NLP software to extract data on clinical features as part of the Mental State Examination (MSE). (iii) To analyse the distribution of NLP-derived MSE features by psychiatric diagnosis. METHODS: EHR data from 25 U.S. mental healthcare providers were de-identified and transformed into a common data model. NLP models were developed to extract 241 MSE features using a deep learning, long short-term memory (LSTM) approach. The NeuroBlu tool (https://www.neuroblu.ai/) was used to analyse the associations of MSE features in 543,849 patients. RESULTS: The figure below illustrates the percentage of patients in each diagnostic category with at least one recorded MSE feature. CONCLUSIONS: Delusions and hallucinations were more likely to be recorded in people with schizophrenia and schizoaffective disorder, and cognitive features were more likely to be recorded in people with dementia. However, mood symptoms were frequently recorded across all diagnoses illustrating their importance as a transdiagnostic clinical feature. NLP-derived clinical information could enhance the potential of EHR data to generate real-world evidence in mental healthcare. DISCLOSURE: This study was funded in full by Holmusk. Cambridge University Press 2022-09-01 /pmc/articles/PMC9563510/ http://dx.doi.org/10.1192/j.eurpsy.2022.286 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstract
Patel, R.
Wee, S.N.
Ramaswamy, R.
Thadani, S.
Guruswamy, G.
Garg, R.
Calvanese, N.
Valko, M.
Rush, A.
Rentería, M.
Sarkar, J.
Kollins, S.
NeuroBlu: a natural language processing (NLP) electronic health record (EHR) data analytic tool to generate real-world evidence in mental healthcare
title NeuroBlu: a natural language processing (NLP) electronic health record (EHR) data analytic tool to generate real-world evidence in mental healthcare
title_full NeuroBlu: a natural language processing (NLP) electronic health record (EHR) data analytic tool to generate real-world evidence in mental healthcare
title_fullStr NeuroBlu: a natural language processing (NLP) electronic health record (EHR) data analytic tool to generate real-world evidence in mental healthcare
title_full_unstemmed NeuroBlu: a natural language processing (NLP) electronic health record (EHR) data analytic tool to generate real-world evidence in mental healthcare
title_short NeuroBlu: a natural language processing (NLP) electronic health record (EHR) data analytic tool to generate real-world evidence in mental healthcare
title_sort neuroblu: a natural language processing (nlp) electronic health record (ehr) data analytic tool to generate real-world evidence in mental healthcare
topic Abstract
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9563510/
http://dx.doi.org/10.1192/j.eurpsy.2022.286
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