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Transfer Learning for Adenocarcinoma Classifications in the Transurethral Resection of Prostate Whole-Slide Images
SIMPLE SUMMARY: In this study, we trained deep learning models to classify TUR-P WSIs into prostate adenocarcinoma and benign (non-neoplastic) lesions using transfer and weakly supervised learning. Overall, the model achieved good classification performance in classifying whole-slide images, demonst...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9563552/ https://www.ncbi.nlm.nih.gov/pubmed/36230666 http://dx.doi.org/10.3390/cancers14194744 |
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author | Tsuneki, Masayuki Abe, Makoto Kanavati, Fahdi |
author_facet | Tsuneki, Masayuki Abe, Makoto Kanavati, Fahdi |
author_sort | Tsuneki, Masayuki |
collection | PubMed |
description | SIMPLE SUMMARY: In this study, we trained deep learning models to classify TUR-P WSIs into prostate adenocarcinoma and benign (non-neoplastic) lesions using transfer and weakly supervised learning. Overall, the model achieved good classification performance in classifying whole-slide images, demonstrating the potential benefit of future deployments in a practical TUR-P histopathological diagnostic workflow system. ABSTRACT: The transurethral resection of the prostate (TUR-P) is an option for benign prostatic diseases, especially nodular hyperplasia patients who have moderate to severe urinary problems that have not responded to medication. Importantly, incidental prostate cancer is diagnosed at the time of TUR-P for benign prostatic disease. TUR-P specimens contain a large number of fragmented prostate tissues; this makes them time consuming to examine for pathologists as they have to check each fragment one by one. In this study, we trained deep learning models to classify TUR-P WSIs into prostate adenocarcinoma and benign (non-neoplastic) lesions using transfer and weakly supervised learning. We evaluated the models on TUR-P, needle biopsy, and The Cancer Genome Atlas (TCGA) public dataset test sets, achieving an ROC-AUC up to 0.984 in TUR-P test sets for adenocarcinoma. The results demonstrate the promising potential of deployment in a practical TUR-P histopathological diagnostic workflow system to improve the efficiency of pathologists. |
format | Online Article Text |
id | pubmed-9563552 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-95635522022-10-15 Transfer Learning for Adenocarcinoma Classifications in the Transurethral Resection of Prostate Whole-Slide Images Tsuneki, Masayuki Abe, Makoto Kanavati, Fahdi Cancers (Basel) Article SIMPLE SUMMARY: In this study, we trained deep learning models to classify TUR-P WSIs into prostate adenocarcinoma and benign (non-neoplastic) lesions using transfer and weakly supervised learning. Overall, the model achieved good classification performance in classifying whole-slide images, demonstrating the potential benefit of future deployments in a practical TUR-P histopathological diagnostic workflow system. ABSTRACT: The transurethral resection of the prostate (TUR-P) is an option for benign prostatic diseases, especially nodular hyperplasia patients who have moderate to severe urinary problems that have not responded to medication. Importantly, incidental prostate cancer is diagnosed at the time of TUR-P for benign prostatic disease. TUR-P specimens contain a large number of fragmented prostate tissues; this makes them time consuming to examine for pathologists as they have to check each fragment one by one. In this study, we trained deep learning models to classify TUR-P WSIs into prostate adenocarcinoma and benign (non-neoplastic) lesions using transfer and weakly supervised learning. We evaluated the models on TUR-P, needle biopsy, and The Cancer Genome Atlas (TCGA) public dataset test sets, achieving an ROC-AUC up to 0.984 in TUR-P test sets for adenocarcinoma. The results demonstrate the promising potential of deployment in a practical TUR-P histopathological diagnostic workflow system to improve the efficiency of pathologists. MDPI 2022-09-28 /pmc/articles/PMC9563552/ /pubmed/36230666 http://dx.doi.org/10.3390/cancers14194744 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tsuneki, Masayuki Abe, Makoto Kanavati, Fahdi Transfer Learning for Adenocarcinoma Classifications in the Transurethral Resection of Prostate Whole-Slide Images |
title | Transfer Learning for Adenocarcinoma Classifications in the Transurethral Resection of Prostate Whole-Slide Images |
title_full | Transfer Learning for Adenocarcinoma Classifications in the Transurethral Resection of Prostate Whole-Slide Images |
title_fullStr | Transfer Learning for Adenocarcinoma Classifications in the Transurethral Resection of Prostate Whole-Slide Images |
title_full_unstemmed | Transfer Learning for Adenocarcinoma Classifications in the Transurethral Resection of Prostate Whole-Slide Images |
title_short | Transfer Learning for Adenocarcinoma Classifications in the Transurethral Resection of Prostate Whole-Slide Images |
title_sort | transfer learning for adenocarcinoma classifications in the transurethral resection of prostate whole-slide images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9563552/ https://www.ncbi.nlm.nih.gov/pubmed/36230666 http://dx.doi.org/10.3390/cancers14194744 |
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