Cargando…

TP53 mutation-associated immune infiltration and a novel risk score model in HNSCC

In HNSCC, few studies have focused on the relationship between wild-type TP53 and mutant TP53-related immunity and prognosis. Our objective was to explore how TP53 mutation regulates the immunophenotype of HNSCC and thus affects the prognosis of HNSCC. Cox and Lasso regression were used to establish...

Descripción completa

Detalles Bibliográficos
Autores principales: Kong, Weili, Han, Yinze, Gu, Hailing, Yang, Hui, Zang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9563607/
https://www.ncbi.nlm.nih.gov/pubmed/36248764
http://dx.doi.org/10.1016/j.bbrep.2022.101359
_version_ 1784808444782444544
author Kong, Weili
Han, Yinze
Gu, Hailing
Yang, Hui
Zang, Yi
author_facet Kong, Weili
Han, Yinze
Gu, Hailing
Yang, Hui
Zang, Yi
author_sort Kong, Weili
collection PubMed
description In HNSCC, few studies have focused on the relationship between wild-type TP53 and mutant TP53-related immunity and prognosis. Our objective was to explore how TP53 mutation regulates the immunophenotype of HNSCC and thus affects the prognosis of HNSCC. Cox and Lasso regression were used to establish a prognostic model of TP53-related immune genes, on which basis a nomogram was used to establish a clinical prediction model, and ROC curves were further used to evaluate the effectiveness of the model. The risk of death in the TP53(WT) group was only 0.68 times that in the TP53(Mut) group (HR = 0.68, CI: 0.5–0.91, P < 0.05). T cells, CD8 T cells, cytotoxic lymphocytes, B lineage, NK cells, myeloid dendritic cells, and fibroblasts were significantly different between the TP53(Mut) and TP53(WT) groups (all P < 0.05). Time - dependent ROC curves of nomogram were plotted for 1-, 3-, and 5-year survival to further verify the predictive power of the nomogram for prognosis, and the AUCs were 0.78, 0.82, and 0.83, respectively. We showed there are significant differences in the immune microenvironment associated with wild-type TP53 and mutant TP53. The immune model associated with TP53 mutation has a good prediction ability for the prognosis of HNSCC and may be of reference value for other tumors with high mutation rate of TP53. Notably, the effect of TP53 mutation on the prognosis of HNSCC could be illustrated from an immunologic perspective.
format Online
Article
Text
id pubmed-9563607
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-95636072022-10-15 TP53 mutation-associated immune infiltration and a novel risk score model in HNSCC Kong, Weili Han, Yinze Gu, Hailing Yang, Hui Zang, Yi Biochem Biophys Rep Research Article In HNSCC, few studies have focused on the relationship between wild-type TP53 and mutant TP53-related immunity and prognosis. Our objective was to explore how TP53 mutation regulates the immunophenotype of HNSCC and thus affects the prognosis of HNSCC. Cox and Lasso regression were used to establish a prognostic model of TP53-related immune genes, on which basis a nomogram was used to establish a clinical prediction model, and ROC curves were further used to evaluate the effectiveness of the model. The risk of death in the TP53(WT) group was only 0.68 times that in the TP53(Mut) group (HR = 0.68, CI: 0.5–0.91, P < 0.05). T cells, CD8 T cells, cytotoxic lymphocytes, B lineage, NK cells, myeloid dendritic cells, and fibroblasts were significantly different between the TP53(Mut) and TP53(WT) groups (all P < 0.05). Time - dependent ROC curves of nomogram were plotted for 1-, 3-, and 5-year survival to further verify the predictive power of the nomogram for prognosis, and the AUCs were 0.78, 0.82, and 0.83, respectively. We showed there are significant differences in the immune microenvironment associated with wild-type TP53 and mutant TP53. The immune model associated with TP53 mutation has a good prediction ability for the prognosis of HNSCC and may be of reference value for other tumors with high mutation rate of TP53. Notably, the effect of TP53 mutation on the prognosis of HNSCC could be illustrated from an immunologic perspective. Elsevier 2022-10-13 /pmc/articles/PMC9563607/ /pubmed/36248764 http://dx.doi.org/10.1016/j.bbrep.2022.101359 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Kong, Weili
Han, Yinze
Gu, Hailing
Yang, Hui
Zang, Yi
TP53 mutation-associated immune infiltration and a novel risk score model in HNSCC
title TP53 mutation-associated immune infiltration and a novel risk score model in HNSCC
title_full TP53 mutation-associated immune infiltration and a novel risk score model in HNSCC
title_fullStr TP53 mutation-associated immune infiltration and a novel risk score model in HNSCC
title_full_unstemmed TP53 mutation-associated immune infiltration and a novel risk score model in HNSCC
title_short TP53 mutation-associated immune infiltration and a novel risk score model in HNSCC
title_sort tp53 mutation-associated immune infiltration and a novel risk score model in hnscc
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9563607/
https://www.ncbi.nlm.nih.gov/pubmed/36248764
http://dx.doi.org/10.1016/j.bbrep.2022.101359
work_keys_str_mv AT kongweili tp53mutationassociatedimmuneinfiltrationandanovelriskscoremodelinhnscc
AT hanyinze tp53mutationassociatedimmuneinfiltrationandanovelriskscoremodelinhnscc
AT guhailing tp53mutationassociatedimmuneinfiltrationandanovelriskscoremodelinhnscc
AT yanghui tp53mutationassociatedimmuneinfiltrationandanovelriskscoremodelinhnscc
AT zangyi tp53mutationassociatedimmuneinfiltrationandanovelriskscoremodelinhnscc