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Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning
OBJECTIVE: To carry out exhaustive data-driven computations for the performance of noninvasive vital signs heart rate (HR), respiratory rate (RR), peripheral oxygen saturation (SpO(2)), and temperature (Temp), considered both independently and in all possible combinations, for early detection of sep...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9566305/ https://www.ncbi.nlm.nih.gov/pubmed/36267121 http://dx.doi.org/10.1093/jamiaopen/ooac080 |
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author | Rangan, Ekanath Srihari Pathinarupothi, Rahul Krishnan Anand, Kanwaljeet J S Snyder, Michael P |
author_facet | Rangan, Ekanath Srihari Pathinarupothi, Rahul Krishnan Anand, Kanwaljeet J S Snyder, Michael P |
author_sort | Rangan, Ekanath Srihari |
collection | PubMed |
description | OBJECTIVE: To carry out exhaustive data-driven computations for the performance of noninvasive vital signs heart rate (HR), respiratory rate (RR), peripheral oxygen saturation (SpO(2)), and temperature (Temp), considered both independently and in all possible combinations, for early detection of sepsis. MATERIALS AND METHODS: By extracting features interpretable by clinicians, we applied Gradient Boosted Decision Tree machine learning on a dataset of 2630 patients to build 240 models. Validation was performed on a geographically distinct dataset. Relative to onset, predictions were clocked as per 16 pairs of monitoring intervals and prediction times, and the outcomes were ranked. RESULTS: The combination of HR and Temp was found to be a minimal feature set yielding maximal predictability with area under receiver operating curve 0.94, sensitivity of 0.85, and specificity of 0.90. Whereas HR and RR each directly enhance prediction, the effects of SpO(2) and Temp are significant only when combined with HR or RR. In benchmarking relative to standard methods Systemic Inflammatory Response Syndrome (SIRS), National Early Warning Score (NEWS), and quick-Sequential Organ Failure Assessment (qSOFA), Vital-SEP outperformed all 3 of them. CONCLUSION: It can be concluded that using intensive care unit data even 2 vital signs are adequate to predict sepsis upto 6 h in advance with promising accuracy comparable to standard scoring methods and other sepsis predictive tools reported in literature. Vital-SEP can be used for fast-track prediction especially in limited resource hospital settings where laboratory based hematologic or biochemical assays may be unavailable, inaccurate, or entail clinically inordinate delays. A prospective study is essential to determine the clinical impact of the proposed sepsis prediction model and evaluate other outcomes such as mortality and duration of hospital stay. |
format | Online Article Text |
id | pubmed-9566305 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-95663052022-10-19 Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning Rangan, Ekanath Srihari Pathinarupothi, Rahul Krishnan Anand, Kanwaljeet J S Snyder, Michael P JAMIA Open Research and Applications OBJECTIVE: To carry out exhaustive data-driven computations for the performance of noninvasive vital signs heart rate (HR), respiratory rate (RR), peripheral oxygen saturation (SpO(2)), and temperature (Temp), considered both independently and in all possible combinations, for early detection of sepsis. MATERIALS AND METHODS: By extracting features interpretable by clinicians, we applied Gradient Boosted Decision Tree machine learning on a dataset of 2630 patients to build 240 models. Validation was performed on a geographically distinct dataset. Relative to onset, predictions were clocked as per 16 pairs of monitoring intervals and prediction times, and the outcomes were ranked. RESULTS: The combination of HR and Temp was found to be a minimal feature set yielding maximal predictability with area under receiver operating curve 0.94, sensitivity of 0.85, and specificity of 0.90. Whereas HR and RR each directly enhance prediction, the effects of SpO(2) and Temp are significant only when combined with HR or RR. In benchmarking relative to standard methods Systemic Inflammatory Response Syndrome (SIRS), National Early Warning Score (NEWS), and quick-Sequential Organ Failure Assessment (qSOFA), Vital-SEP outperformed all 3 of them. CONCLUSION: It can be concluded that using intensive care unit data even 2 vital signs are adequate to predict sepsis upto 6 h in advance with promising accuracy comparable to standard scoring methods and other sepsis predictive tools reported in literature. Vital-SEP can be used for fast-track prediction especially in limited resource hospital settings where laboratory based hematologic or biochemical assays may be unavailable, inaccurate, or entail clinically inordinate delays. A prospective study is essential to determine the clinical impact of the proposed sepsis prediction model and evaluate other outcomes such as mortality and duration of hospital stay. Oxford University Press 2022-10-14 /pmc/articles/PMC9566305/ /pubmed/36267121 http://dx.doi.org/10.1093/jamiaopen/ooac080 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Research and Applications Rangan, Ekanath Srihari Pathinarupothi, Rahul Krishnan Anand, Kanwaljeet J S Snyder, Michael P Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning |
title | Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning |
title_full | Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning |
title_fullStr | Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning |
title_full_unstemmed | Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning |
title_short | Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning |
title_sort | performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning |
topic | Research and Applications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9566305/ https://www.ncbi.nlm.nih.gov/pubmed/36267121 http://dx.doi.org/10.1093/jamiaopen/ooac080 |
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