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Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning

OBJECTIVE: To carry out exhaustive data-driven computations for the performance of noninvasive vital signs heart rate (HR), respiratory rate (RR), peripheral oxygen saturation (SpO(2)), and temperature (Temp), considered both independently and in all possible combinations, for early detection of sep...

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Autores principales: Rangan, Ekanath Srihari, Pathinarupothi, Rahul Krishnan, Anand, Kanwaljeet J S, Snyder, Michael P
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9566305/
https://www.ncbi.nlm.nih.gov/pubmed/36267121
http://dx.doi.org/10.1093/jamiaopen/ooac080
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author Rangan, Ekanath Srihari
Pathinarupothi, Rahul Krishnan
Anand, Kanwaljeet J S
Snyder, Michael P
author_facet Rangan, Ekanath Srihari
Pathinarupothi, Rahul Krishnan
Anand, Kanwaljeet J S
Snyder, Michael P
author_sort Rangan, Ekanath Srihari
collection PubMed
description OBJECTIVE: To carry out exhaustive data-driven computations for the performance of noninvasive vital signs heart rate (HR), respiratory rate (RR), peripheral oxygen saturation (SpO(2)), and temperature (Temp), considered both independently and in all possible combinations, for early detection of sepsis. MATERIALS AND METHODS: By extracting features interpretable by clinicians, we applied Gradient Boosted Decision Tree machine learning on a dataset of 2630 patients to build 240 models. Validation was performed on a geographically distinct dataset. Relative to onset, predictions were clocked as per 16 pairs of monitoring intervals and prediction times, and the outcomes were ranked. RESULTS: The combination of HR and Temp was found to be a minimal feature set yielding maximal predictability with area under receiver operating curve 0.94, sensitivity of 0.85, and specificity of 0.90. Whereas HR and RR each directly enhance prediction, the effects of SpO(2) and Temp are significant only when combined with HR or RR. In benchmarking relative to standard methods Systemic Inflammatory Response Syndrome (SIRS), National Early Warning Score (NEWS), and quick-Sequential Organ Failure Assessment (qSOFA), Vital-SEP outperformed all 3 of them. CONCLUSION: It can be concluded that using intensive care unit data even 2 vital signs are adequate to predict sepsis upto 6 h in advance with promising accuracy comparable to standard scoring methods and other sepsis predictive tools reported in literature. Vital-SEP can be used for fast-track prediction especially in limited resource hospital settings where laboratory based hematologic or biochemical assays may be unavailable, inaccurate, or entail clinically inordinate delays. A prospective study is essential to determine the clinical impact of the proposed sepsis prediction model and evaluate other outcomes such as mortality and duration of hospital stay.
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spelling pubmed-95663052022-10-19 Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning Rangan, Ekanath Srihari Pathinarupothi, Rahul Krishnan Anand, Kanwaljeet J S Snyder, Michael P JAMIA Open Research and Applications OBJECTIVE: To carry out exhaustive data-driven computations for the performance of noninvasive vital signs heart rate (HR), respiratory rate (RR), peripheral oxygen saturation (SpO(2)), and temperature (Temp), considered both independently and in all possible combinations, for early detection of sepsis. MATERIALS AND METHODS: By extracting features interpretable by clinicians, we applied Gradient Boosted Decision Tree machine learning on a dataset of 2630 patients to build 240 models. Validation was performed on a geographically distinct dataset. Relative to onset, predictions were clocked as per 16 pairs of monitoring intervals and prediction times, and the outcomes were ranked. RESULTS: The combination of HR and Temp was found to be a minimal feature set yielding maximal predictability with area under receiver operating curve 0.94, sensitivity of 0.85, and specificity of 0.90. Whereas HR and RR each directly enhance prediction, the effects of SpO(2) and Temp are significant only when combined with HR or RR. In benchmarking relative to standard methods Systemic Inflammatory Response Syndrome (SIRS), National Early Warning Score (NEWS), and quick-Sequential Organ Failure Assessment (qSOFA), Vital-SEP outperformed all 3 of them. CONCLUSION: It can be concluded that using intensive care unit data even 2 vital signs are adequate to predict sepsis upto 6 h in advance with promising accuracy comparable to standard scoring methods and other sepsis predictive tools reported in literature. Vital-SEP can be used for fast-track prediction especially in limited resource hospital settings where laboratory based hematologic or biochemical assays may be unavailable, inaccurate, or entail clinically inordinate delays. A prospective study is essential to determine the clinical impact of the proposed sepsis prediction model and evaluate other outcomes such as mortality and duration of hospital stay. Oxford University Press 2022-10-14 /pmc/articles/PMC9566305/ /pubmed/36267121 http://dx.doi.org/10.1093/jamiaopen/ooac080 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Research and Applications
Rangan, Ekanath Srihari
Pathinarupothi, Rahul Krishnan
Anand, Kanwaljeet J S
Snyder, Michael P
Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning
title Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning
title_full Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning
title_fullStr Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning
title_full_unstemmed Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning
title_short Performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning
title_sort performance effectiveness of vital parameter combinations for early warning of sepsis—an exhaustive study using machine learning
topic Research and Applications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9566305/
https://www.ncbi.nlm.nih.gov/pubmed/36267121
http://dx.doi.org/10.1093/jamiaopen/ooac080
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