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Construction of Mitochondrial Protection and Monitoring Model of Lon Protease Based on Machine Learning under Myocardial Ischemia Environment

The localization of a protein's submitochondrial structure is important for therapeutic design of associated disorders caused by mitochondrial abnormalities because many human diseases are directly tied to mitochondria. When Lon protease expression changes, glycolysis replaces respiratory metab...

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Detalles Bibliográficos
Autores principales: Wang, Jinliang, Zhang, Yang, Shi, Haijiao, Yang, Ying, Wang, Shuai, Wang, Fengrong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9569194/
https://www.ncbi.nlm.nih.gov/pubmed/36254306
http://dx.doi.org/10.1155/2022/4805009
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author Wang, Jinliang
Zhang, Yang
Shi, Haijiao
Yang, Ying
Wang, Shuai
Wang, Fengrong
author_facet Wang, Jinliang
Zhang, Yang
Shi, Haijiao
Yang, Ying
Wang, Shuai
Wang, Fengrong
author_sort Wang, Jinliang
collection PubMed
description The localization of a protein's submitochondrial structure is important for therapeutic design of associated disorders caused by mitochondrial abnormalities because many human diseases are directly tied to mitochondria. When Lon protease expression changes, glycolysis replaces respiratory metabolism in the cell, which is a common occurrence in cancer cells. The fact that protein formation is a dynamic research object makes it impossible to reproduce the unique living environment of proteins in an experimental setting, which surely makes it more challenging to determine protein function through experiments. This research suggests a model of Lon protease-based mitochondrial protection under myocardial ischemia based on ML (machine learning). To ensure the balance of all submitochondrial proteins, the data set is processed using a random oversampling method, each overlapping fixed-length subsequence that is created from the protein sequence functions as a channel in the convolution layer. The results demonstrate that applying the oversampling strategy increases the ROC value by 17.6%-21.3%. Our prediction method is successful as evidenced by the fact that ML prediction outperforms the predictions of other conventional classifiers.
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spelling pubmed-95691942022-10-16 Construction of Mitochondrial Protection and Monitoring Model of Lon Protease Based on Machine Learning under Myocardial Ischemia Environment Wang, Jinliang Zhang, Yang Shi, Haijiao Yang, Ying Wang, Shuai Wang, Fengrong J Environ Public Health Research Article The localization of a protein's submitochondrial structure is important for therapeutic design of associated disorders caused by mitochondrial abnormalities because many human diseases are directly tied to mitochondria. When Lon protease expression changes, glycolysis replaces respiratory metabolism in the cell, which is a common occurrence in cancer cells. The fact that protein formation is a dynamic research object makes it impossible to reproduce the unique living environment of proteins in an experimental setting, which surely makes it more challenging to determine protein function through experiments. This research suggests a model of Lon protease-based mitochondrial protection under myocardial ischemia based on ML (machine learning). To ensure the balance of all submitochondrial proteins, the data set is processed using a random oversampling method, each overlapping fixed-length subsequence that is created from the protein sequence functions as a channel in the convolution layer. The results demonstrate that applying the oversampling strategy increases the ROC value by 17.6%-21.3%. Our prediction method is successful as evidenced by the fact that ML prediction outperforms the predictions of other conventional classifiers. Hindawi 2022-10-08 /pmc/articles/PMC9569194/ /pubmed/36254306 http://dx.doi.org/10.1155/2022/4805009 Text en Copyright © 2022 Jinliang Wang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Wang, Jinliang
Zhang, Yang
Shi, Haijiao
Yang, Ying
Wang, Shuai
Wang, Fengrong
Construction of Mitochondrial Protection and Monitoring Model of Lon Protease Based on Machine Learning under Myocardial Ischemia Environment
title Construction of Mitochondrial Protection and Monitoring Model of Lon Protease Based on Machine Learning under Myocardial Ischemia Environment
title_full Construction of Mitochondrial Protection and Monitoring Model of Lon Protease Based on Machine Learning under Myocardial Ischemia Environment
title_fullStr Construction of Mitochondrial Protection and Monitoring Model of Lon Protease Based on Machine Learning under Myocardial Ischemia Environment
title_full_unstemmed Construction of Mitochondrial Protection and Monitoring Model of Lon Protease Based on Machine Learning under Myocardial Ischemia Environment
title_short Construction of Mitochondrial Protection and Monitoring Model of Lon Protease Based on Machine Learning under Myocardial Ischemia Environment
title_sort construction of mitochondrial protection and monitoring model of lon protease based on machine learning under myocardial ischemia environment
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9569194/
https://www.ncbi.nlm.nih.gov/pubmed/36254306
http://dx.doi.org/10.1155/2022/4805009
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