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Genome-Wide Prediction and Analysis of Oryza Species NRP Genes in Rice Blast Resistance
Members of the N-rich proteins (NRPs) gene family play important roles in the plant endoplasmic reticulum stress in response, which can be triggered by plant pathogens’ infection. Previous studies of the NRP gene family have been limited to only a few plants, such as soybean and Arabidopsis thaliana...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9569735/ https://www.ncbi.nlm.nih.gov/pubmed/36233270 http://dx.doi.org/10.3390/ijms231911967 |
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author | Liang, Dong Yu, Junjie Song, Tianqiao Zhang, Rongsheng Du, Yan Yu, Mina Cao, Huijuan Pan, Xiayan Qiao, Junqing Liu, Youzhou Qi, Zhongqiang Liu, Yongfeng |
author_facet | Liang, Dong Yu, Junjie Song, Tianqiao Zhang, Rongsheng Du, Yan Yu, Mina Cao, Huijuan Pan, Xiayan Qiao, Junqing Liu, Youzhou Qi, Zhongqiang Liu, Yongfeng |
author_sort | Liang, Dong |
collection | PubMed |
description | Members of the N-rich proteins (NRPs) gene family play important roles in the plant endoplasmic reticulum stress in response, which can be triggered by plant pathogens’ infection. Previous studies of the NRP gene family have been limited to only a few plants, such as soybean and Arabidopsis thaliana. Thus, their evolutionary characteristics in the Oryza species and biological functions in rice defense against the pathogenic fungus Magnaporthe oryzae have remained unexplored. In the present study, we demonstrated that the NRP genes family may have originated in the early stages of plant evolution, and that they have been strongly conserved during the evolution of the Oryza species. Domain organization of NRPs was found to be highly conserved within but not between subgroups. OsNRP1, an NRP gene in the Oryza sativa japonica group, was specifically up-regulated during the early stages of rice-M. oryzae interactions-inhibited M. oryzae infection. Predicted protein-protein interaction networks and transcription-factor binding sites revealed a candidate interactor, bZIP50, which may be involved in OsNRP1-mediated rice resistance against M. oryzae infection. Taken together, our results established a basis for future studies of the NRP gene family and provided molecular insights into rice immune responses to M. oryzae. |
format | Online Article Text |
id | pubmed-9569735 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-95697352022-10-17 Genome-Wide Prediction and Analysis of Oryza Species NRP Genes in Rice Blast Resistance Liang, Dong Yu, Junjie Song, Tianqiao Zhang, Rongsheng Du, Yan Yu, Mina Cao, Huijuan Pan, Xiayan Qiao, Junqing Liu, Youzhou Qi, Zhongqiang Liu, Yongfeng Int J Mol Sci Article Members of the N-rich proteins (NRPs) gene family play important roles in the plant endoplasmic reticulum stress in response, which can be triggered by plant pathogens’ infection. Previous studies of the NRP gene family have been limited to only a few plants, such as soybean and Arabidopsis thaliana. Thus, their evolutionary characteristics in the Oryza species and biological functions in rice defense against the pathogenic fungus Magnaporthe oryzae have remained unexplored. In the present study, we demonstrated that the NRP genes family may have originated in the early stages of plant evolution, and that they have been strongly conserved during the evolution of the Oryza species. Domain organization of NRPs was found to be highly conserved within but not between subgroups. OsNRP1, an NRP gene in the Oryza sativa japonica group, was specifically up-regulated during the early stages of rice-M. oryzae interactions-inhibited M. oryzae infection. Predicted protein-protein interaction networks and transcription-factor binding sites revealed a candidate interactor, bZIP50, which may be involved in OsNRP1-mediated rice resistance against M. oryzae infection. Taken together, our results established a basis for future studies of the NRP gene family and provided molecular insights into rice immune responses to M. oryzae. MDPI 2022-10-08 /pmc/articles/PMC9569735/ /pubmed/36233270 http://dx.doi.org/10.3390/ijms231911967 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Liang, Dong Yu, Junjie Song, Tianqiao Zhang, Rongsheng Du, Yan Yu, Mina Cao, Huijuan Pan, Xiayan Qiao, Junqing Liu, Youzhou Qi, Zhongqiang Liu, Yongfeng Genome-Wide Prediction and Analysis of Oryza Species NRP Genes in Rice Blast Resistance |
title | Genome-Wide Prediction and Analysis of Oryza Species NRP Genes in Rice Blast Resistance |
title_full | Genome-Wide Prediction and Analysis of Oryza Species NRP Genes in Rice Blast Resistance |
title_fullStr | Genome-Wide Prediction and Analysis of Oryza Species NRP Genes in Rice Blast Resistance |
title_full_unstemmed | Genome-Wide Prediction and Analysis of Oryza Species NRP Genes in Rice Blast Resistance |
title_short | Genome-Wide Prediction and Analysis of Oryza Species NRP Genes in Rice Blast Resistance |
title_sort | genome-wide prediction and analysis of oryza species nrp genes in rice blast resistance |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9569735/ https://www.ncbi.nlm.nih.gov/pubmed/36233270 http://dx.doi.org/10.3390/ijms231911967 |
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