Cargando…
Genome-Wide Identification of ERF Transcription Factor Family and Functional Analysis of the Drought Stress-Responsive Genes in Melilotus albus
As an important forage legume with high values in feed and medicine, Melilotus albus has been widely cultivated. The AP2/ERF transcription factor has been shown to play an important regulatory role in plant drought resistance, but it has not been reported in the legume forage crop M. albus. To digge...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9570465/ https://www.ncbi.nlm.nih.gov/pubmed/36233332 http://dx.doi.org/10.3390/ijms231912023 |
_version_ | 1784810113447493632 |
---|---|
author | Wei, Na Zhai, Qingyan Li, Hang Zheng, Shuwen Zhang, Jiyu Liu, Wenxian |
author_facet | Wei, Na Zhai, Qingyan Li, Hang Zheng, Shuwen Zhang, Jiyu Liu, Wenxian |
author_sort | Wei, Na |
collection | PubMed |
description | As an important forage legume with high values in feed and medicine, Melilotus albus has been widely cultivated. The AP2/ERF transcription factor has been shown to play an important regulatory role in plant drought resistance, but it has not been reported in the legume forage crop M. albus. To digger the genes of M. albus in response to drought stress, we identified and analyzed the ERF gene family of M. albus at the genome-wide level. A total of 100 MaERF genes containing a single AP2 domain sequence were identified in this study, named MaERF001 to MaERF100, and bioinformatics analysis was performed. Collinearity analysis indicated that segmental duplication may play a key role in the expansion of the M. albus ERF gene family. Cis-acting element predictions suggest that MaERF genes are involved in various hormonal responses and abiotic stresses. The expression patterns indicated that MaERFs responded to drought stress to varying degrees. Furthermore, four up-regulated ERFs (MaERF008, MaERF037, MaERF054 and MaERF058) under drought stress were overexpressed in yeast and indicated their biological functions to confer the tolerance to drought. This work will advance the understanding of the molecular mechanisms underlying the drought response in M. albus. Further study of the promising potential candidate genes identified in this study will provide a valuable resource as the next step in functional genomics studies and improve the possibility of improving drought tolerance in M. albus by transgenic approaches. |
format | Online Article Text |
id | pubmed-9570465 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-95704652022-10-17 Genome-Wide Identification of ERF Transcription Factor Family and Functional Analysis of the Drought Stress-Responsive Genes in Melilotus albus Wei, Na Zhai, Qingyan Li, Hang Zheng, Shuwen Zhang, Jiyu Liu, Wenxian Int J Mol Sci Article As an important forage legume with high values in feed and medicine, Melilotus albus has been widely cultivated. The AP2/ERF transcription factor has been shown to play an important regulatory role in plant drought resistance, but it has not been reported in the legume forage crop M. albus. To digger the genes of M. albus in response to drought stress, we identified and analyzed the ERF gene family of M. albus at the genome-wide level. A total of 100 MaERF genes containing a single AP2 domain sequence were identified in this study, named MaERF001 to MaERF100, and bioinformatics analysis was performed. Collinearity analysis indicated that segmental duplication may play a key role in the expansion of the M. albus ERF gene family. Cis-acting element predictions suggest that MaERF genes are involved in various hormonal responses and abiotic stresses. The expression patterns indicated that MaERFs responded to drought stress to varying degrees. Furthermore, four up-regulated ERFs (MaERF008, MaERF037, MaERF054 and MaERF058) under drought stress were overexpressed in yeast and indicated their biological functions to confer the tolerance to drought. This work will advance the understanding of the molecular mechanisms underlying the drought response in M. albus. Further study of the promising potential candidate genes identified in this study will provide a valuable resource as the next step in functional genomics studies and improve the possibility of improving drought tolerance in M. albus by transgenic approaches. MDPI 2022-10-10 /pmc/articles/PMC9570465/ /pubmed/36233332 http://dx.doi.org/10.3390/ijms231912023 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Wei, Na Zhai, Qingyan Li, Hang Zheng, Shuwen Zhang, Jiyu Liu, Wenxian Genome-Wide Identification of ERF Transcription Factor Family and Functional Analysis of the Drought Stress-Responsive Genes in Melilotus albus |
title | Genome-Wide Identification of ERF Transcription Factor Family and Functional Analysis of the Drought Stress-Responsive Genes in Melilotus albus |
title_full | Genome-Wide Identification of ERF Transcription Factor Family and Functional Analysis of the Drought Stress-Responsive Genes in Melilotus albus |
title_fullStr | Genome-Wide Identification of ERF Transcription Factor Family and Functional Analysis of the Drought Stress-Responsive Genes in Melilotus albus |
title_full_unstemmed | Genome-Wide Identification of ERF Transcription Factor Family and Functional Analysis of the Drought Stress-Responsive Genes in Melilotus albus |
title_short | Genome-Wide Identification of ERF Transcription Factor Family and Functional Analysis of the Drought Stress-Responsive Genes in Melilotus albus |
title_sort | genome-wide identification of erf transcription factor family and functional analysis of the drought stress-responsive genes in melilotus albus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9570465/ https://www.ncbi.nlm.nih.gov/pubmed/36233332 http://dx.doi.org/10.3390/ijms231912023 |
work_keys_str_mv | AT weina genomewideidentificationoferftranscriptionfactorfamilyandfunctionalanalysisofthedroughtstressresponsivegenesinmelilotusalbus AT zhaiqingyan genomewideidentificationoferftranscriptionfactorfamilyandfunctionalanalysisofthedroughtstressresponsivegenesinmelilotusalbus AT lihang genomewideidentificationoferftranscriptionfactorfamilyandfunctionalanalysisofthedroughtstressresponsivegenesinmelilotusalbus AT zhengshuwen genomewideidentificationoferftranscriptionfactorfamilyandfunctionalanalysisofthedroughtstressresponsivegenesinmelilotusalbus AT zhangjiyu genomewideidentificationoferftranscriptionfactorfamilyandfunctionalanalysisofthedroughtstressresponsivegenesinmelilotusalbus AT liuwenxian genomewideidentificationoferftranscriptionfactorfamilyandfunctionalanalysisofthedroughtstressresponsivegenesinmelilotusalbus |