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SealID: Saimaa Ringed Seal Re-Identification Dataset

Wildlife camera traps and crowd-sourced image material provide novel possibilities to monitor endangered animal species. The massive data volumes call for automatic methods to solve various tasks related to population monitoring, such as the re-identification of individual animals. The Saimaa ringed...

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Autores principales: Nepovinnykh, Ekaterina, Eerola, Tuomas, Biard, Vincent, Mutka, Piia, Niemi, Marja, Kunnasranta, Mervi, Kälviäinen, Heikki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9570853/
https://www.ncbi.nlm.nih.gov/pubmed/36236699
http://dx.doi.org/10.3390/s22197602
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author Nepovinnykh, Ekaterina
Eerola, Tuomas
Biard, Vincent
Mutka, Piia
Niemi, Marja
Kunnasranta, Mervi
Kälviäinen, Heikki
author_facet Nepovinnykh, Ekaterina
Eerola, Tuomas
Biard, Vincent
Mutka, Piia
Niemi, Marja
Kunnasranta, Mervi
Kälviäinen, Heikki
author_sort Nepovinnykh, Ekaterina
collection PubMed
description Wildlife camera traps and crowd-sourced image material provide novel possibilities to monitor endangered animal species. The massive data volumes call for automatic methods to solve various tasks related to population monitoring, such as the re-identification of individual animals. The Saimaa ringed seal (Pusa hispida saimensis) is an endangered subspecies only found in Lake Saimaa, Finland, and is one of the few existing freshwater seal species. Ringed seals have permanent pelage patterns that are unique to each individual and that can be used for the identification of individuals. A large variation in poses, further exacerbated by the deformable nature of seals, together with varying appearance and low contrast between the ring pattern and the rest of the pelage makes the Saimaa ringed seal re-identification task very challenging, providing a good benchmark by which to evaluate state-of-the-art re-identification methods. Therefore, we make our Saimaa ringed seal image (SealID) dataset (N = 57) publicly available for research purposes. In this paper, the dataset is described, the evaluation protocol for re-identification methods is proposed, and the results for two baseline methods—HotSpotter and NORPPA—are provided. The SealID dataset has been made publicly available.
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spelling pubmed-95708532022-10-17 SealID: Saimaa Ringed Seal Re-Identification Dataset Nepovinnykh, Ekaterina Eerola, Tuomas Biard, Vincent Mutka, Piia Niemi, Marja Kunnasranta, Mervi Kälviäinen, Heikki Sensors (Basel) Article Wildlife camera traps and crowd-sourced image material provide novel possibilities to monitor endangered animal species. The massive data volumes call for automatic methods to solve various tasks related to population monitoring, such as the re-identification of individual animals. The Saimaa ringed seal (Pusa hispida saimensis) is an endangered subspecies only found in Lake Saimaa, Finland, and is one of the few existing freshwater seal species. Ringed seals have permanent pelage patterns that are unique to each individual and that can be used for the identification of individuals. A large variation in poses, further exacerbated by the deformable nature of seals, together with varying appearance and low contrast between the ring pattern and the rest of the pelage makes the Saimaa ringed seal re-identification task very challenging, providing a good benchmark by which to evaluate state-of-the-art re-identification methods. Therefore, we make our Saimaa ringed seal image (SealID) dataset (N = 57) publicly available for research purposes. In this paper, the dataset is described, the evaluation protocol for re-identification methods is proposed, and the results for two baseline methods—HotSpotter and NORPPA—are provided. The SealID dataset has been made publicly available. MDPI 2022-10-07 /pmc/articles/PMC9570853/ /pubmed/36236699 http://dx.doi.org/10.3390/s22197602 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Nepovinnykh, Ekaterina
Eerola, Tuomas
Biard, Vincent
Mutka, Piia
Niemi, Marja
Kunnasranta, Mervi
Kälviäinen, Heikki
SealID: Saimaa Ringed Seal Re-Identification Dataset
title SealID: Saimaa Ringed Seal Re-Identification Dataset
title_full SealID: Saimaa Ringed Seal Re-Identification Dataset
title_fullStr SealID: Saimaa Ringed Seal Re-Identification Dataset
title_full_unstemmed SealID: Saimaa Ringed Seal Re-Identification Dataset
title_short SealID: Saimaa Ringed Seal Re-Identification Dataset
title_sort sealid: saimaa ringed seal re-identification dataset
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9570853/
https://www.ncbi.nlm.nih.gov/pubmed/36236699
http://dx.doi.org/10.3390/s22197602
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