Cargando…

Identification of Key Genes Related to Dormancy Control in Prunus Species by Meta-Analysis of RNAseq Data

Bud dormancy is a genotype-dependent mechanism observed in Prunus species in which bud growth is inhibited, and the accumulation of a specific amount of chilling (endodormancy) and heat (ecodormancy) is necessary to resume growth and reach flowering. We analyzed publicly available transcriptome data...

Descripción completa

Detalles Bibliográficos
Autores principales:	Calle, Alejandro, Saski, Christopher, Wünsch, Ana, Grimplet, Jérôme, Gasic, Ksenija
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573011/ https://www.ncbi.nlm.nih.gov/pubmed/36235335 http://dx.doi.org/10.3390/plants11192469

Ejemplares similares

Transcriptomics reveal the genetic coordination of early defense to Armillaria root rot (ARR) in Prunus spp
por: Cai, Lichun, et al.
Publicado: (2023)

Genome-wide SNP identification in Prunus rootstocks germplasm collections using Genotyping-by-Sequencing: phylogenetic analysis, distribution of SNPs and prediction of their effect on gene function
por: Guajardo, Verónica, et al.
Publicado: (2020)

Identification and Characterization of DAMs Mutations Associated With Early Blooming in Sweet Cherry, and Validation of DNA-Based Markers for Selection
por: Calle, Alejandro, et al.
Publicado: (2021)

Genomic Sequencing of Japanese Plum (Prunus salicina Lindl.) Mutants Provides a New Model for Rosaceae Fruit Ripening Studies
por: Fernandez i Marti, Angel, et al.
Publicado: (2018)

Multiple-population QTL mapping of maturity and fruit-quality traits reveals LG4 region as a breeding target in sweet cherry (Prunus avium L.)
por: Calle, Alejandro, et al.
Publicado: (2020)

Peach [Prunus persica (L.) Batsch] Cultivars Differ in Apparent Base Temperature and Growing Degree Hour Requirement for Floral Bud Break
por: Bielenberg, Douglas G., et al.
Publicado: (2022)

Identification, Structural and Functional Characterization of Dormancy Regulator Genes in Apricot (Prunus armeniaca L.)
por: Balogh, Eszter, et al.
Publicado: (2019)

The transcriptome of Mycobacterium tuberculosis in a lipid-rich dormancy model through RNAseq analysis
por: Aguilar-Ayala, Diana A., et al.
Publicado: (2017)

Genetic Dissection of Bloom Time in Low Chilling Sweet Cherry (Prunus avium L.) Using a Multi-Family QTL Approach
por: Calle, Alejandro, et al.
Publicado: (2020)

Integrative Identification of Crucial Genes Associated With Plant Hormone-Mediated Bud Dormancy in Prunus mume
por: Li, Ping, et al.
Publicado: (2021)

Comprehensive Cloning of Prunus mume Dormancy Associated MADS-Box Genes and Their Response in Flower Bud Development and Dormancy
por: Zhao, Kai, et al.
Publicado: (2018)

Meta-analysis of RNA-Seq studies reveals genes with dominant functions during flower bud endo- to eco-dormancy transition in Prunus species
por: Canton, Monica, et al.
Publicado: (2021)

Multi-environment genomic prediction for soluble solids content in peach (Prunus persica)
por: Hardner, Craig M., et al.
Publicado: (2022)

Ppe.XapF: High throughput KASP assays to identify fruit response to Xanthomonas arboricola pv. pruni (Xap) in peach
por: Fleming, Margaret B., et al.
Publicado: (2022)

Expression of ABA Metabolism-Related Genes Suggests Similarities and Differences Between Seed Dormancy and Bud Dormancy of Peach (Prunus persica)
por: Wang, Dongling, et al.
Publicado: (2016)

Transcriptome Profiles Reveal the Crucial Roles of Hormone and Sugar in the Bud Dormancy of Prunus mume
por: Zhang, Zhiyong, et al.
Publicado: (2018)

Short day transcriptomic programming during induction of dormancy in grapevine
por: Fennell, Anne Y., et al.
Publicado: (2015)

Construction of High Density Sweet Cherry (Prunus avium L.) Linkage Maps Using Microsatellite Markers and SNPs Detected by Genotyping-by-Sequencing (GBS)
por: Guajardo, Verónica, et al.
Publicado: (2015)

Genomic and Bioinformatic Resources for Perennial Fruit Species
por: Grimplet, Jérôme
Publicado: (2022)

Genome-Wide Identification and Function of Aquaporin Genes During Dormancy and Sprouting Periods of Kernel-Using Apricot (Prunus armeniaca L.)
por: Li, Shaofeng, et al.
Publicado: (2021)

Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium)
por: Castède, Sophie, et al.
Publicado: (2015)

Dormant but Active: Chilling Accumulation Modulates the Epigenome and Transcriptome of Prunus avium During Bud Dormancy
por: Rothkegel, Karin, et al.
Publicado: (2020)

Integrated mRNAseq and microRNAseq data analysis for grade III gliomas
por: Dai, Junqiang, et al.
Publicado: (2017)

Screening and identification of key genes regulating fall dormancy in alfalfa leaves
por: Du, Hongqi, et al.
Publicado: (2017)

Transcriptome analysis of seed dormancy after rinsing and chilling in ornamental peaches (Prunus persica (L.) Batsch)
por: Kanjana, Worarad, et al.
Publicado: (2016)

Chilling Requirements of Apricot (Prunus armeniaca L.) Cultivars Using Male Meiosis as a Dormancy Biomarker
por: Fadón, Erica, et al.
Publicado: (2023)

Ppe.CR.1 DNA test for predicting chilling requirement in peach
por: Demirel, Gizem, et al.
Publicado: (2023)

Prunus genetics and applications after de novo genome sequencing: achievements and prospects
por: Aranzana, Maria José, et al.
Publicado: (2019)

Development of Electrochemical Oscillation Method for Identification of Prunus persica, Prunus davidiana, and Prunus armeniaca Nuts
por: Yan, Shuai, et al.
Publicado: (2020)

Prunus sunhangii: A new species of Prunus from central China
por: Zhang, Xiaoshuang, et al.
Publicado: (2019)

Seed dormancy in alpine species
por: Schwienbacher, Erich, et al.
Publicado: (2011)

DNA Methylation Analysis of Dormancy Release in Almond (Prunus dulcis) Flower Buds Using Epi-Genotyping by Sequencing
por: Prudencio, Ángela S., et al.
Publicado: (2018)

Fall Applications of Ethephon Modulates Gene Networks Controlling Bud Development during Dormancy in Peach (Prunus Persica)
por: Liu, Jianyang, et al.
Publicado: (2022)

Genotyping by Sequencing for SNP-Based Linkage Map Construction and QTL Analysis of Chilling Requirement and Bloom Date in Peach [Prunus persica (L.) Batsch]
por: Bielenberg, Douglas Gary, et al.
Publicado: (2015)

Expressional regulation of PpDAM5 and PpDAM6, peach (Prunus persica) dormancy-associated MADS-box genes, by low temperature and dormancy-breaking reagent treatment
por: Yamane, Hisayo, et al.
Publicado: (2011)

BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation
por: Gadepalli, Venkat Sundar, et al.
Publicado: (2019)

Plum (Prunus domestica) Trees Transformed with Poplar FT1 Result in Altered Architecture, Dormancy Requirement, and Continuous Flowering
por: Srinivasan, Chinnathambi, et al.
Publicado: (2012)

The collaborative mode by PmSVPs and PmDAMs reveals neofunctionalization in the switch of the flower bud development and dormancy for Prunus mume
por: Zhao, Kai, et al.
Publicado: (2022)

Genetic characterization of worldwide Prunus domestica (plum) germplasm using sequence-based genotyping
por: Zhebentyayeva, Tetyana, et al.
Publicado: (2019)

Key Metabolite Differences Between Korean Pine (Pinus koraiensis) Seeds With Primary Physiological Dormancy and No-Dormancy
por: Song, Yuan, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_l5echgo0g095sl0bqi9pj0u1n6