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C. elegans toxicant responses vary among genetically diverse individuals

The genetic variability of toxicant responses among indisviduals in humans and mammalian models requires practically untenable sample sizes to create comprehensive chemical hazard risk evaluations. To address this need, tractable model systems enable reproducible and efficient experimental workflows...

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Autores principales: Widmayer, Samuel J., Crombie, Timothy A., Nyaanga, Joy N., Evans, Kathryn S., Andersen, Erik C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573778/
https://www.ncbi.nlm.nih.gov/pubmed/35995124
http://dx.doi.org/10.1016/j.tox.2022.153292
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author Widmayer, Samuel J.
Crombie, Timothy A.
Nyaanga, Joy N.
Evans, Kathryn S.
Andersen, Erik C.
author_facet Widmayer, Samuel J.
Crombie, Timothy A.
Nyaanga, Joy N.
Evans, Kathryn S.
Andersen, Erik C.
author_sort Widmayer, Samuel J.
collection PubMed
description The genetic variability of toxicant responses among indisviduals in humans and mammalian models requires practically untenable sample sizes to create comprehensive chemical hazard risk evaluations. To address this need, tractable model systems enable reproducible and efficient experimental workflows to collect high-replication measurements of exposure cohorts. Caenorhabditis elegans is a premier toxicology model that has revolutionized our understanding of cellular responses to environmental pollutants and boasts robust genomic resources and high levels of genetic variation across the species. In this study, we performed dose-response analysis across 23 environmental toxicants using eight C. elegans strains representative of species-wide genetic diversity. We observed substantial variation in EC10 estimates and slope parameter estimates of dose-response curves of different strains, demonstrating that genetic background is a significant driver of differential toxicant susceptibility. We also showed that, across all toxicants, at least one C. elegans strain exhibited a significantly different EC10 or slope estimate compared to the reference strain, N2 (PD1074), indicating that population-wide differences among strains are necessary to understand responses to toxicants. Moreover, we quantified the heritability of responses (phenotypic variance attributable to genetic differences between individuals) to each toxicant exposure and observed a correlation between the exposure closest to the species-agnostic EC10 estimate and the exposure that exhibited the most heritable response. At least 20% of the variance in susceptibility to at least one exposure level of each compound was explained by genetic differences among the eight C. elegans strains. Taken together, these results provide robust evidence that heritable genetic variation explains differential susceptibility across an array of environmental pollutants and that genetically diverse C. elegans strains should be deployed to aid high-throughput toxicological screening efforts.
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spelling pubmed-95737782022-10-16 C. elegans toxicant responses vary among genetically diverse individuals Widmayer, Samuel J. Crombie, Timothy A. Nyaanga, Joy N. Evans, Kathryn S. Andersen, Erik C. Toxicology Article The genetic variability of toxicant responses among indisviduals in humans and mammalian models requires practically untenable sample sizes to create comprehensive chemical hazard risk evaluations. To address this need, tractable model systems enable reproducible and efficient experimental workflows to collect high-replication measurements of exposure cohorts. Caenorhabditis elegans is a premier toxicology model that has revolutionized our understanding of cellular responses to environmental pollutants and boasts robust genomic resources and high levels of genetic variation across the species. In this study, we performed dose-response analysis across 23 environmental toxicants using eight C. elegans strains representative of species-wide genetic diversity. We observed substantial variation in EC10 estimates and slope parameter estimates of dose-response curves of different strains, demonstrating that genetic background is a significant driver of differential toxicant susceptibility. We also showed that, across all toxicants, at least one C. elegans strain exhibited a significantly different EC10 or slope estimate compared to the reference strain, N2 (PD1074), indicating that population-wide differences among strains are necessary to understand responses to toxicants. Moreover, we quantified the heritability of responses (phenotypic variance attributable to genetic differences between individuals) to each toxicant exposure and observed a correlation between the exposure closest to the species-agnostic EC10 estimate and the exposure that exhibited the most heritable response. At least 20% of the variance in susceptibility to at least one exposure level of each compound was explained by genetic differences among the eight C. elegans strains. Taken together, these results provide robust evidence that heritable genetic variation explains differential susceptibility across an array of environmental pollutants and that genetically diverse C. elegans strains should be deployed to aid high-throughput toxicological screening efforts. 2022-09 2022-08-20 /pmc/articles/PMC9573778/ /pubmed/35995124 http://dx.doi.org/10.1016/j.tox.2022.153292 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Widmayer, Samuel J.
Crombie, Timothy A.
Nyaanga, Joy N.
Evans, Kathryn S.
Andersen, Erik C.
C. elegans toxicant responses vary among genetically diverse individuals
title C. elegans toxicant responses vary among genetically diverse individuals
title_full C. elegans toxicant responses vary among genetically diverse individuals
title_fullStr C. elegans toxicant responses vary among genetically diverse individuals
title_full_unstemmed C. elegans toxicant responses vary among genetically diverse individuals
title_short C. elegans toxicant responses vary among genetically diverse individuals
title_sort c. elegans toxicant responses vary among genetically diverse individuals
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573778/
https://www.ncbi.nlm.nih.gov/pubmed/35995124
http://dx.doi.org/10.1016/j.tox.2022.153292
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