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Optimization of the base editor BE4max in chicken somatic cells
Advanced animal reproductive and breeding biotechnology has made it possible to alter traits or create new genetic resources by the direct knock-in or knock-out of target genes. Base editing technology can achieve single-base mutations without double-stranded DNA breaks, and is a promising tool for...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573927/ https://www.ncbi.nlm.nih.gov/pubmed/36240636 http://dx.doi.org/10.1016/j.psj.2022.102174 |
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author | Xu, Tianpeng Zhong, Jing Huang, Zhenwen Yu, Lintian Zheng, Jitan Xie, Long Sun, Lingling Liu, Xingting Lu, Yangqing |
author_facet | Xu, Tianpeng Zhong, Jing Huang, Zhenwen Yu, Lintian Zheng, Jitan Xie, Long Sun, Lingling Liu, Xingting Lu, Yangqing |
author_sort | Xu, Tianpeng |
collection | PubMed |
description | Advanced animal reproductive and breeding biotechnology has made it possible to alter traits or create new genetic resources by the direct knock-in or knock-out of target genes. Base editing technology can achieve single-base mutations without double-stranded DNA breaks, and is a promising tool for use in the genetic modification and breeding of livestock. However, the application of base editors (BEs) in chicken has not been optimized. We evaluated the efficacy of BE4max in chicken somatic cells (DF-1). The key element of BE4max, cytosine deaminase (APOBEC), was optimized for chicken. The base editing efficiency of the optimized chBE4max editor, compared with the original BE4max editor, was improved by 10.4% ± 4.6. By inhibiting the expression of the uracil DNA glycosylase-related gene methyl binding domain protein 4 (MBD4) by siRNA in chicken DF-1 cells, the editing efficiency was enhanced by 4.43% ± 1.4 compared to the control. These results suggest that this editor may have applications in poultry breeding studies. |
format | Online Article Text |
id | pubmed-9573927 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-95739272022-10-18 Optimization of the base editor BE4max in chicken somatic cells Xu, Tianpeng Zhong, Jing Huang, Zhenwen Yu, Lintian Zheng, Jitan Xie, Long Sun, Lingling Liu, Xingting Lu, Yangqing Poult Sci GENETICS AND MOLECULAR BIOLOGY Advanced animal reproductive and breeding biotechnology has made it possible to alter traits or create new genetic resources by the direct knock-in or knock-out of target genes. Base editing technology can achieve single-base mutations without double-stranded DNA breaks, and is a promising tool for use in the genetic modification and breeding of livestock. However, the application of base editors (BEs) in chicken has not been optimized. We evaluated the efficacy of BE4max in chicken somatic cells (DF-1). The key element of BE4max, cytosine deaminase (APOBEC), was optimized for chicken. The base editing efficiency of the optimized chBE4max editor, compared with the original BE4max editor, was improved by 10.4% ± 4.6. By inhibiting the expression of the uracil DNA glycosylase-related gene methyl binding domain protein 4 (MBD4) by siRNA in chicken DF-1 cells, the editing efficiency was enhanced by 4.43% ± 1.4 compared to the control. These results suggest that this editor may have applications in poultry breeding studies. Elsevier 2022-09-13 /pmc/articles/PMC9573927/ /pubmed/36240636 http://dx.doi.org/10.1016/j.psj.2022.102174 Text en © 2022 Published by Elsevier Inc. on behalf of Poultry Science Association Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | GENETICS AND MOLECULAR BIOLOGY Xu, Tianpeng Zhong, Jing Huang, Zhenwen Yu, Lintian Zheng, Jitan Xie, Long Sun, Lingling Liu, Xingting Lu, Yangqing Optimization of the base editor BE4max in chicken somatic cells |
title | Optimization of the base editor BE4max in chicken somatic cells |
title_full | Optimization of the base editor BE4max in chicken somatic cells |
title_fullStr | Optimization of the base editor BE4max in chicken somatic cells |
title_full_unstemmed | Optimization of the base editor BE4max in chicken somatic cells |
title_short | Optimization of the base editor BE4max in chicken somatic cells |
title_sort | optimization of the base editor be4max in chicken somatic cells |
topic | GENETICS AND MOLECULAR BIOLOGY |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573927/ https://www.ncbi.nlm.nih.gov/pubmed/36240636 http://dx.doi.org/10.1016/j.psj.2022.102174 |
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