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Optimization of the base editor BE4max in chicken somatic cells

Advanced animal reproductive and breeding biotechnology has made it possible to alter traits or create new genetic resources by the direct knock-in or knock-out of target genes. Base editing technology can achieve single-base mutations without double-stranded DNA breaks, and is a promising tool for...

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Autores principales: Xu, Tianpeng, Zhong, Jing, Huang, Zhenwen, Yu, Lintian, Zheng, Jitan, Xie, Long, Sun, Lingling, Liu, Xingting, Lu, Yangqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573927/
https://www.ncbi.nlm.nih.gov/pubmed/36240636
http://dx.doi.org/10.1016/j.psj.2022.102174
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author Xu, Tianpeng
Zhong, Jing
Huang, Zhenwen
Yu, Lintian
Zheng, Jitan
Xie, Long
Sun, Lingling
Liu, Xingting
Lu, Yangqing
author_facet Xu, Tianpeng
Zhong, Jing
Huang, Zhenwen
Yu, Lintian
Zheng, Jitan
Xie, Long
Sun, Lingling
Liu, Xingting
Lu, Yangqing
author_sort Xu, Tianpeng
collection PubMed
description Advanced animal reproductive and breeding biotechnology has made it possible to alter traits or create new genetic resources by the direct knock-in or knock-out of target genes. Base editing technology can achieve single-base mutations without double-stranded DNA breaks, and is a promising tool for use in the genetic modification and breeding of livestock. However, the application of base editors (BEs) in chicken has not been optimized. We evaluated the efficacy of BE4max in chicken somatic cells (DF-1). The key element of BE4max, cytosine deaminase (APOBEC), was optimized for chicken. The base editing efficiency of the optimized chBE4max editor, compared with the original BE4max editor, was improved by 10.4% ± 4.6. By inhibiting the expression of the uracil DNA glycosylase-related gene methyl binding domain protein 4 (MBD4) by siRNA in chicken DF-1 cells, the editing efficiency was enhanced by 4.43% ± 1.4 compared to the control. These results suggest that this editor may have applications in poultry breeding studies.
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spelling pubmed-95739272022-10-18 Optimization of the base editor BE4max in chicken somatic cells Xu, Tianpeng Zhong, Jing Huang, Zhenwen Yu, Lintian Zheng, Jitan Xie, Long Sun, Lingling Liu, Xingting Lu, Yangqing Poult Sci GENETICS AND MOLECULAR BIOLOGY Advanced animal reproductive and breeding biotechnology has made it possible to alter traits or create new genetic resources by the direct knock-in or knock-out of target genes. Base editing technology can achieve single-base mutations without double-stranded DNA breaks, and is a promising tool for use in the genetic modification and breeding of livestock. However, the application of base editors (BEs) in chicken has not been optimized. We evaluated the efficacy of BE4max in chicken somatic cells (DF-1). The key element of BE4max, cytosine deaminase (APOBEC), was optimized for chicken. The base editing efficiency of the optimized chBE4max editor, compared with the original BE4max editor, was improved by 10.4% ± 4.6. By inhibiting the expression of the uracil DNA glycosylase-related gene methyl binding domain protein 4 (MBD4) by siRNA in chicken DF-1 cells, the editing efficiency was enhanced by 4.43% ± 1.4 compared to the control. These results suggest that this editor may have applications in poultry breeding studies. Elsevier 2022-09-13 /pmc/articles/PMC9573927/ /pubmed/36240636 http://dx.doi.org/10.1016/j.psj.2022.102174 Text en © 2022 Published by Elsevier Inc. on behalf of Poultry Science Association Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle GENETICS AND MOLECULAR BIOLOGY
Xu, Tianpeng
Zhong, Jing
Huang, Zhenwen
Yu, Lintian
Zheng, Jitan
Xie, Long
Sun, Lingling
Liu, Xingting
Lu, Yangqing
Optimization of the base editor BE4max in chicken somatic cells
title Optimization of the base editor BE4max in chicken somatic cells
title_full Optimization of the base editor BE4max in chicken somatic cells
title_fullStr Optimization of the base editor BE4max in chicken somatic cells
title_full_unstemmed Optimization of the base editor BE4max in chicken somatic cells
title_short Optimization of the base editor BE4max in chicken somatic cells
title_sort optimization of the base editor be4max in chicken somatic cells
topic GENETICS AND MOLECULAR BIOLOGY
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573927/
https://www.ncbi.nlm.nih.gov/pubmed/36240636
http://dx.doi.org/10.1016/j.psj.2022.102174
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