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Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC
The membrane‐associated RING‐CH (MARCH) family, a member of the E3 ubiquitin ligases, has been confirmed by a growing number of studies to be associated with immune function and has been highlighted as a potential immunotherapy target. In our research, hepatocellular carcinoma (HCC) patients were di...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573977/ https://www.ncbi.nlm.nih.gov/pubmed/36263042 http://dx.doi.org/10.3389/fimmu.2022.997265 |
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author | Cao, Jun Tu, Dao-yuan Zhou, Jie Jiang, Guo-qing Jin, Sheng-jie Su, Bing-bing Tang, Hao Tang, Yu-hong Wang, Ao-qing Wang, Qian Liu, Ren-jie Zhang, Chi Bai, Dou-sheng |
author_facet | Cao, Jun Tu, Dao-yuan Zhou, Jie Jiang, Guo-qing Jin, Sheng-jie Su, Bing-bing Tang, Hao Tang, Yu-hong Wang, Ao-qing Wang, Qian Liu, Ren-jie Zhang, Chi Bai, Dou-sheng |
author_sort | Cao, Jun |
collection | PubMed |
description | The membrane‐associated RING‐CH (MARCH) family, a member of the E3 ubiquitin ligases, has been confirmed by a growing number of studies to be associated with immune function and has been highlighted as a potential immunotherapy target. In our research, hepatocellular carcinoma (HCC) patients were divided into C1 and C2 MARCH ligase-related patterns by the non-negative matrix factorization (NMF) algorithm. Multiple analyses revealed that the MARCH ligase-related cluster was related to prognosis, clinicopathological characteristics, and the tumor immune microenvironment (TIME). Next, the signature (risk score) of the MARCH prognosis was constructed, including eight genes associated with the MARCH ligase (CYP2C9, G6PD, SLC1A5, SPP1, ANXA10, CDC20, PON1, and FTCD). The risk score showed accuracy and stability. We found that the correlations between risk score and TIME, tumor mutation burden (TMB), prognosis, and clinicopathological characteristics were significant. Additionally, the risk score also had important guiding significance for HCC treatment, including chemotherapy, immunotherapy, and transarterial chemoembolization (TACE). |
format | Online Article Text |
id | pubmed-9573977 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95739772022-10-18 Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC Cao, Jun Tu, Dao-yuan Zhou, Jie Jiang, Guo-qing Jin, Sheng-jie Su, Bing-bing Tang, Hao Tang, Yu-hong Wang, Ao-qing Wang, Qian Liu, Ren-jie Zhang, Chi Bai, Dou-sheng Front Immunol Immunology The membrane‐associated RING‐CH (MARCH) family, a member of the E3 ubiquitin ligases, has been confirmed by a growing number of studies to be associated with immune function and has been highlighted as a potential immunotherapy target. In our research, hepatocellular carcinoma (HCC) patients were divided into C1 and C2 MARCH ligase-related patterns by the non-negative matrix factorization (NMF) algorithm. Multiple analyses revealed that the MARCH ligase-related cluster was related to prognosis, clinicopathological characteristics, and the tumor immune microenvironment (TIME). Next, the signature (risk score) of the MARCH prognosis was constructed, including eight genes associated with the MARCH ligase (CYP2C9, G6PD, SLC1A5, SPP1, ANXA10, CDC20, PON1, and FTCD). The risk score showed accuracy and stability. We found that the correlations between risk score and TIME, tumor mutation burden (TMB), prognosis, and clinicopathological characteristics were significant. Additionally, the risk score also had important guiding significance for HCC treatment, including chemotherapy, immunotherapy, and transarterial chemoembolization (TACE). Frontiers Media S.A. 2022-10-03 /pmc/articles/PMC9573977/ /pubmed/36263042 http://dx.doi.org/10.3389/fimmu.2022.997265 Text en Copyright © 2022 Cao, Tu, Zhou, Jiang, Jin, Su, Tang, Tang, Wang, Wang, Liu, Zhang and Bai https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Cao, Jun Tu, Dao-yuan Zhou, Jie Jiang, Guo-qing Jin, Sheng-jie Su, Bing-bing Tang, Hao Tang, Yu-hong Wang, Ao-qing Wang, Qian Liu, Ren-jie Zhang, Chi Bai, Dou-sheng Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC |
title | Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC |
title_full | Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC |
title_fullStr | Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC |
title_full_unstemmed | Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC |
title_short | Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC |
title_sort | comprehensive analysis of the clinical significance, immune infiltration, and biological role of march ligases in hcc |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573977/ https://www.ncbi.nlm.nih.gov/pubmed/36263042 http://dx.doi.org/10.3389/fimmu.2022.997265 |
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