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Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC

The membrane‐associated RING‐CH (MARCH) family, a member of the E3 ubiquitin ligases, has been confirmed by a growing number of studies to be associated with immune function and has been highlighted as a potential immunotherapy target. In our research, hepatocellular carcinoma (HCC) patients were di...

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Autores principales: Cao, Jun, Tu, Dao-yuan, Zhou, Jie, Jiang, Guo-qing, Jin, Sheng-jie, Su, Bing-bing, Tang, Hao, Tang, Yu-hong, Wang, Ao-qing, Wang, Qian, Liu, Ren-jie, Zhang, Chi, Bai, Dou-sheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573977/
https://www.ncbi.nlm.nih.gov/pubmed/36263042
http://dx.doi.org/10.3389/fimmu.2022.997265
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author Cao, Jun
Tu, Dao-yuan
Zhou, Jie
Jiang, Guo-qing
Jin, Sheng-jie
Su, Bing-bing
Tang, Hao
Tang, Yu-hong
Wang, Ao-qing
Wang, Qian
Liu, Ren-jie
Zhang, Chi
Bai, Dou-sheng
author_facet Cao, Jun
Tu, Dao-yuan
Zhou, Jie
Jiang, Guo-qing
Jin, Sheng-jie
Su, Bing-bing
Tang, Hao
Tang, Yu-hong
Wang, Ao-qing
Wang, Qian
Liu, Ren-jie
Zhang, Chi
Bai, Dou-sheng
author_sort Cao, Jun
collection PubMed
description The membrane‐associated RING‐CH (MARCH) family, a member of the E3 ubiquitin ligases, has been confirmed by a growing number of studies to be associated with immune function and has been highlighted as a potential immunotherapy target. In our research, hepatocellular carcinoma (HCC) patients were divided into C1 and C2 MARCH ligase-related patterns by the non-negative matrix factorization (NMF) algorithm. Multiple analyses revealed that the MARCH ligase-related cluster was related to prognosis, clinicopathological characteristics, and the tumor immune microenvironment (TIME). Next, the signature (risk score) of the MARCH prognosis was constructed, including eight genes associated with the MARCH ligase (CYP2C9, G6PD, SLC1A5, SPP1, ANXA10, CDC20, PON1, and FTCD). The risk score showed accuracy and stability. We found that the correlations between risk score and TIME, tumor mutation burden (TMB), prognosis, and clinicopathological characteristics were significant. Additionally, the risk score also had important guiding significance for HCC treatment, including chemotherapy, immunotherapy, and transarterial chemoembolization (TACE).
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spelling pubmed-95739772022-10-18 Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC Cao, Jun Tu, Dao-yuan Zhou, Jie Jiang, Guo-qing Jin, Sheng-jie Su, Bing-bing Tang, Hao Tang, Yu-hong Wang, Ao-qing Wang, Qian Liu, Ren-jie Zhang, Chi Bai, Dou-sheng Front Immunol Immunology The membrane‐associated RING‐CH (MARCH) family, a member of the E3 ubiquitin ligases, has been confirmed by a growing number of studies to be associated with immune function and has been highlighted as a potential immunotherapy target. In our research, hepatocellular carcinoma (HCC) patients were divided into C1 and C2 MARCH ligase-related patterns by the non-negative matrix factorization (NMF) algorithm. Multiple analyses revealed that the MARCH ligase-related cluster was related to prognosis, clinicopathological characteristics, and the tumor immune microenvironment (TIME). Next, the signature (risk score) of the MARCH prognosis was constructed, including eight genes associated with the MARCH ligase (CYP2C9, G6PD, SLC1A5, SPP1, ANXA10, CDC20, PON1, and FTCD). The risk score showed accuracy and stability. We found that the correlations between risk score and TIME, tumor mutation burden (TMB), prognosis, and clinicopathological characteristics were significant. Additionally, the risk score also had important guiding significance for HCC treatment, including chemotherapy, immunotherapy, and transarterial chemoembolization (TACE). Frontiers Media S.A. 2022-10-03 /pmc/articles/PMC9573977/ /pubmed/36263042 http://dx.doi.org/10.3389/fimmu.2022.997265 Text en Copyright © 2022 Cao, Tu, Zhou, Jiang, Jin, Su, Tang, Tang, Wang, Wang, Liu, Zhang and Bai https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Cao, Jun
Tu, Dao-yuan
Zhou, Jie
Jiang, Guo-qing
Jin, Sheng-jie
Su, Bing-bing
Tang, Hao
Tang, Yu-hong
Wang, Ao-qing
Wang, Qian
Liu, Ren-jie
Zhang, Chi
Bai, Dou-sheng
Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC
title Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC
title_full Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC
title_fullStr Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC
title_full_unstemmed Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC
title_short Comprehensive analysis of the clinical significance, immune infiltration, and biological role of MARCH ligases in HCC
title_sort comprehensive analysis of the clinical significance, immune infiltration, and biological role of march ligases in hcc
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9573977/
https://www.ncbi.nlm.nih.gov/pubmed/36263042
http://dx.doi.org/10.3389/fimmu.2022.997265
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