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Mutation profile of acute myeloid leukaemia in a Chinese cohort by targeted next‐generation sequencing

BACKGROUND: Acute myeloid leukaemia (AML) results from the clonal expansion of blast cells of myeloid origin driven by genomic defects. The advances in next‐generation sequencing (NGS) have allowed the identification of many mutated genes important in the pathogenesis of AML. AIMS: In this study, we...

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Autores principales: Lit, Benny Man Wai, Guo, Belinda B., Malherbe, Jacques A. J., Kwong, Yok Lam, Erber, Wendy N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9575498/
https://www.ncbi.nlm.nih.gov/pubmed/34617422
http://dx.doi.org/10.1002/cnr2.1573
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author Lit, Benny Man Wai
Guo, Belinda B.
Malherbe, Jacques A. J.
Kwong, Yok Lam
Erber, Wendy N.
author_facet Lit, Benny Man Wai
Guo, Belinda B.
Malherbe, Jacques A. J.
Kwong, Yok Lam
Erber, Wendy N.
author_sort Lit, Benny Man Wai
collection PubMed
description BACKGROUND: Acute myeloid leukaemia (AML) results from the clonal expansion of blast cells of myeloid origin driven by genomic defects. The advances in next‐generation sequencing (NGS) have allowed the identification of many mutated genes important in the pathogenesis of AML. AIMS: In this study, we aimed to assess the mutation types and frequency in a Chinese cohort presenting with de novo AML cohort using a targeted NGS strategy. METHODS: In total, we studied samples from 87 adult patients with de novo AML who had no prior history of cytotoxic chemotherapy. Samples were evaluated using a 120‐gene targeted NGS panel to assess the mutation profile. RESULTS: Of the 87 AML patients, there were 60 (69%) with a normal karyotype. 89.7% of patients had variants, with an average of 1.9 mutations per patient (range: 0–5 mutations per patient). DNMT3A variants were the most common, being detected in 33 patients (37.9%). NPM1 (34.5%), IDH1/2 (24.1%) and FLT3‐ITD (20.7%) mutations was the next most common. Of the patients with DNMT3A mutations, 24.2% also had mutations NPM1 and FLT3‐ITD and 6.1% NPM1, FLT3‐ITD and IDH mutations. CONCLUSION: Both DNMT3A and NPM1 mutations were more common than in other Chinese and Western AML cohorts that have been studied. DNMT3A mutations tended to co‐occur with NPM1 and FLT3‐ITD mutations and were most commonly seen with a normal karyotype.
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spelling pubmed-95754982022-10-18 Mutation profile of acute myeloid leukaemia in a Chinese cohort by targeted next‐generation sequencing Lit, Benny Man Wai Guo, Belinda B. Malherbe, Jacques A. J. Kwong, Yok Lam Erber, Wendy N. Cancer Rep (Hoboken) Original Articles BACKGROUND: Acute myeloid leukaemia (AML) results from the clonal expansion of blast cells of myeloid origin driven by genomic defects. The advances in next‐generation sequencing (NGS) have allowed the identification of many mutated genes important in the pathogenesis of AML. AIMS: In this study, we aimed to assess the mutation types and frequency in a Chinese cohort presenting with de novo AML cohort using a targeted NGS strategy. METHODS: In total, we studied samples from 87 adult patients with de novo AML who had no prior history of cytotoxic chemotherapy. Samples were evaluated using a 120‐gene targeted NGS panel to assess the mutation profile. RESULTS: Of the 87 AML patients, there were 60 (69%) with a normal karyotype. 89.7% of patients had variants, with an average of 1.9 mutations per patient (range: 0–5 mutations per patient). DNMT3A variants were the most common, being detected in 33 patients (37.9%). NPM1 (34.5%), IDH1/2 (24.1%) and FLT3‐ITD (20.7%) mutations was the next most common. Of the patients with DNMT3A mutations, 24.2% also had mutations NPM1 and FLT3‐ITD and 6.1% NPM1, FLT3‐ITD and IDH mutations. CONCLUSION: Both DNMT3A and NPM1 mutations were more common than in other Chinese and Western AML cohorts that have been studied. DNMT3A mutations tended to co‐occur with NPM1 and FLT3‐ITD mutations and were most commonly seen with a normal karyotype. John Wiley and Sons Inc. 2021-10-06 /pmc/articles/PMC9575498/ /pubmed/34617422 http://dx.doi.org/10.1002/cnr2.1573 Text en © 2021 The Authors. Cancer Reports published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Lit, Benny Man Wai
Guo, Belinda B.
Malherbe, Jacques A. J.
Kwong, Yok Lam
Erber, Wendy N.
Mutation profile of acute myeloid leukaemia in a Chinese cohort by targeted next‐generation sequencing
title Mutation profile of acute myeloid leukaemia in a Chinese cohort by targeted next‐generation sequencing
title_full Mutation profile of acute myeloid leukaemia in a Chinese cohort by targeted next‐generation sequencing
title_fullStr Mutation profile of acute myeloid leukaemia in a Chinese cohort by targeted next‐generation sequencing
title_full_unstemmed Mutation profile of acute myeloid leukaemia in a Chinese cohort by targeted next‐generation sequencing
title_short Mutation profile of acute myeloid leukaemia in a Chinese cohort by targeted next‐generation sequencing
title_sort mutation profile of acute myeloid leukaemia in a chinese cohort by targeted next‐generation sequencing
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9575498/
https://www.ncbi.nlm.nih.gov/pubmed/34617422
http://dx.doi.org/10.1002/cnr2.1573
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