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Research on melanoma image segmentation by incorporating medical prior knowledge
BACKGROUND: Melanoma image segmentation has important clinical value in the diagnosis and treatment of skin diseases. However, due to the difficulty of obtaining data sets, and the sample imbalance, the quality of melanoma image data sets is low, which reduces the accuracy and the effectiveness of c...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9575861/ https://www.ncbi.nlm.nih.gov/pubmed/36262125 http://dx.doi.org/10.7717/peerj-cs.1122 |
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author | Zhao, Hong Wang, Aolong Zhang, Chenpeng |
author_facet | Zhao, Hong Wang, Aolong Zhang, Chenpeng |
author_sort | Zhao, Hong |
collection | PubMed |
description | BACKGROUND: Melanoma image segmentation has important clinical value in the diagnosis and treatment of skin diseases. However, due to the difficulty of obtaining data sets, and the sample imbalance, the quality of melanoma image data sets is low, which reduces the accuracy and the effectiveness of computer aided diagnosis of melanoma image. OBJECTIVE: In this work, a method of melanoma image segmentation by incorporating medical prior knowledge is proposed to improve the fidelity of melanoma image segmentation. METHODS: Anatomical analysis of the melanoma image reveal the star shape of the melanoma image, which can be encoded into the loss function of the UNet model as a prior knowledge. RESULTS: Our experimental results on the ISIC-2017 data set demonstrate that the model by incorporating medical prior knowledge obtain a mIoU (Mean Intersection over Union) of 87.41%, a Dice Similarity Coefficient of 93.49%. CONCLUSION: Therefore, the model by incorporating medical prior knowledge achieve the first rank in the segmentation task comparing to other models and has high clinical value. |
format | Online Article Text |
id | pubmed-9575861 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95758612022-10-18 Research on melanoma image segmentation by incorporating medical prior knowledge Zhao, Hong Wang, Aolong Zhang, Chenpeng PeerJ Comput Sci Bioinformatics BACKGROUND: Melanoma image segmentation has important clinical value in the diagnosis and treatment of skin diseases. However, due to the difficulty of obtaining data sets, and the sample imbalance, the quality of melanoma image data sets is low, which reduces the accuracy and the effectiveness of computer aided diagnosis of melanoma image. OBJECTIVE: In this work, a method of melanoma image segmentation by incorporating medical prior knowledge is proposed to improve the fidelity of melanoma image segmentation. METHODS: Anatomical analysis of the melanoma image reveal the star shape of the melanoma image, which can be encoded into the loss function of the UNet model as a prior knowledge. RESULTS: Our experimental results on the ISIC-2017 data set demonstrate that the model by incorporating medical prior knowledge obtain a mIoU (Mean Intersection over Union) of 87.41%, a Dice Similarity Coefficient of 93.49%. CONCLUSION: Therefore, the model by incorporating medical prior knowledge achieve the first rank in the segmentation task comparing to other models and has high clinical value. PeerJ Inc. 2022-10-03 /pmc/articles/PMC9575861/ /pubmed/36262125 http://dx.doi.org/10.7717/peerj-cs.1122 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, made available under the Creative Commons Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/) . This work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. |
spellingShingle | Bioinformatics Zhao, Hong Wang, Aolong Zhang, Chenpeng Research on melanoma image segmentation by incorporating medical prior knowledge |
title | Research on melanoma image segmentation by incorporating medical prior knowledge |
title_full | Research on melanoma image segmentation by incorporating medical prior knowledge |
title_fullStr | Research on melanoma image segmentation by incorporating medical prior knowledge |
title_full_unstemmed | Research on melanoma image segmentation by incorporating medical prior knowledge |
title_short | Research on melanoma image segmentation by incorporating medical prior knowledge |
title_sort | research on melanoma image segmentation by incorporating medical prior knowledge |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9575861/ https://www.ncbi.nlm.nih.gov/pubmed/36262125 http://dx.doi.org/10.7717/peerj-cs.1122 |
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