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Research on melanoma image segmentation by incorporating medical prior knowledge

BACKGROUND: Melanoma image segmentation has important clinical value in the diagnosis and treatment of skin diseases. However, due to the difficulty of obtaining data sets, and the sample imbalance, the quality of melanoma image data sets is low, which reduces the accuracy and the effectiveness of c...

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Autores principales: Zhao, Hong, Wang, Aolong, Zhang, Chenpeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9575861/
https://www.ncbi.nlm.nih.gov/pubmed/36262125
http://dx.doi.org/10.7717/peerj-cs.1122
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author Zhao, Hong
Wang, Aolong
Zhang, Chenpeng
author_facet Zhao, Hong
Wang, Aolong
Zhang, Chenpeng
author_sort Zhao, Hong
collection PubMed
description BACKGROUND: Melanoma image segmentation has important clinical value in the diagnosis and treatment of skin diseases. However, due to the difficulty of obtaining data sets, and the sample imbalance, the quality of melanoma image data sets is low, which reduces the accuracy and the effectiveness of computer aided diagnosis of melanoma image. OBJECTIVE: In this work, a method of melanoma image segmentation by incorporating medical prior knowledge is proposed to improve the fidelity of melanoma image segmentation. METHODS: Anatomical analysis of the melanoma image reveal the star shape of the melanoma image, which can be encoded into the loss function of the UNet model as a prior knowledge. RESULTS: Our experimental results on the ISIC-2017 data set demonstrate that the model by incorporating medical prior knowledge obtain a mIoU (Mean Intersection over Union) of 87.41%, a Dice Similarity Coefficient of 93.49%. CONCLUSION: Therefore, the model by incorporating medical prior knowledge achieve the first rank in the segmentation task comparing to other models and has high clinical value.
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spelling pubmed-95758612022-10-18 Research on melanoma image segmentation by incorporating medical prior knowledge Zhao, Hong Wang, Aolong Zhang, Chenpeng PeerJ Comput Sci Bioinformatics BACKGROUND: Melanoma image segmentation has important clinical value in the diagnosis and treatment of skin diseases. However, due to the difficulty of obtaining data sets, and the sample imbalance, the quality of melanoma image data sets is low, which reduces the accuracy and the effectiveness of computer aided diagnosis of melanoma image. OBJECTIVE: In this work, a method of melanoma image segmentation by incorporating medical prior knowledge is proposed to improve the fidelity of melanoma image segmentation. METHODS: Anatomical analysis of the melanoma image reveal the star shape of the melanoma image, which can be encoded into the loss function of the UNet model as a prior knowledge. RESULTS: Our experimental results on the ISIC-2017 data set demonstrate that the model by incorporating medical prior knowledge obtain a mIoU (Mean Intersection over Union) of 87.41%, a Dice Similarity Coefficient of 93.49%. CONCLUSION: Therefore, the model by incorporating medical prior knowledge achieve the first rank in the segmentation task comparing to other models and has high clinical value. PeerJ Inc. 2022-10-03 /pmc/articles/PMC9575861/ /pubmed/36262125 http://dx.doi.org/10.7717/peerj-cs.1122 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, made available under the Creative Commons Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/) . This work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
spellingShingle Bioinformatics
Zhao, Hong
Wang, Aolong
Zhang, Chenpeng
Research on melanoma image segmentation by incorporating medical prior knowledge
title Research on melanoma image segmentation by incorporating medical prior knowledge
title_full Research on melanoma image segmentation by incorporating medical prior knowledge
title_fullStr Research on melanoma image segmentation by incorporating medical prior knowledge
title_full_unstemmed Research on melanoma image segmentation by incorporating medical prior knowledge
title_short Research on melanoma image segmentation by incorporating medical prior knowledge
title_sort research on melanoma image segmentation by incorporating medical prior knowledge
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9575861/
https://www.ncbi.nlm.nih.gov/pubmed/36262125
http://dx.doi.org/10.7717/peerj-cs.1122
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