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Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy
We described a clinical, laboratory, and genetic presentation of a pathogenic variant of the CYP1B1 gene through a report of a case of primary congenital glaucoma and a trio analysis of this candidate variant in the family with the Sanger sequencing method and eventually completed our study with the...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korea Genome Organization
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576475/ https://www.ncbi.nlm.nih.gov/pubmed/36239105 http://dx.doi.org/10.5808/gi.21044 |
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author | Zavarzadeh, Parisima Ghaffarian Bonyadi, Morteza Abedi, Zahra |
author_facet | Zavarzadeh, Parisima Ghaffarian Bonyadi, Morteza Abedi, Zahra |
author_sort | Zavarzadeh, Parisima Ghaffarian |
collection | PubMed |
description | We described a clinical, laboratory, and genetic presentation of a pathogenic variant of the CYP1B1 gene through a report of a case of primary congenital glaucoma and a trio analysis of this candidate variant in the family with the Sanger sequencing method and eventually completed our study with the secondary/incidental findings. This study reports a rare case of primary congenital glaucoma, an 8-year-old female child with a negative family history of glaucoma and uncontrolled intraocular pressure. This case’s whole-exome sequencing data analysis presents a homozygous pathogenic single nucleotide variant in the CYP1B1 gene (NM_000104:exon3:c.G1103A:p.R368H). At the same time, this pathogenic variant was obtained as a heterozygous state in her unaffected father but not her mother. The diagnosis was made based on molecular findings of whole-exome sequencing data analysis. Therefore, the clinical reports and bioinformatics findings supported the relation between the candidate pathogenic variant and the disease. However, it should not be forgotten that primary congenital glaucoma is not peculiar to the CYP1B1 gene. Since the chance of developing autosomal recessive disorders with low allele frequency and unrelated parents is extraordinary in offspring. However, further data analysis of whole-exome sequencing and Sanger sequencing method were applied to obtain the type of mutation and how it was carried to the offspring. |
format | Online Article Text |
id | pubmed-9576475 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Korea Genome Organization |
record_format | MEDLINE/PubMed |
spelling | pubmed-95764752022-10-19 Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy Zavarzadeh, Parisima Ghaffarian Bonyadi, Morteza Abedi, Zahra Genomics Inform Original Article We described a clinical, laboratory, and genetic presentation of a pathogenic variant of the CYP1B1 gene through a report of a case of primary congenital glaucoma and a trio analysis of this candidate variant in the family with the Sanger sequencing method and eventually completed our study with the secondary/incidental findings. This study reports a rare case of primary congenital glaucoma, an 8-year-old female child with a negative family history of glaucoma and uncontrolled intraocular pressure. This case’s whole-exome sequencing data analysis presents a homozygous pathogenic single nucleotide variant in the CYP1B1 gene (NM_000104:exon3:c.G1103A:p.R368H). At the same time, this pathogenic variant was obtained as a heterozygous state in her unaffected father but not her mother. The diagnosis was made based on molecular findings of whole-exome sequencing data analysis. Therefore, the clinical reports and bioinformatics findings supported the relation between the candidate pathogenic variant and the disease. However, it should not be forgotten that primary congenital glaucoma is not peculiar to the CYP1B1 gene. Since the chance of developing autosomal recessive disorders with low allele frequency and unrelated parents is extraordinary in offspring. However, further data analysis of whole-exome sequencing and Sanger sequencing method were applied to obtain the type of mutation and how it was carried to the offspring. Korea Genome Organization 2022-09-06 /pmc/articles/PMC9576475/ /pubmed/36239105 http://dx.doi.org/10.5808/gi.21044 Text en (c) 2022, Korea Genome Organization https://creativecommons.org/licenses/by/4.0/(CC) This is an open-access article distributed under the terms of the Creative Commons Attribution license(https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Zavarzadeh, Parisima Ghaffarian Bonyadi, Morteza Abedi, Zahra Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy |
title | Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy |
title_full | Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy |
title_fullStr | Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy |
title_full_unstemmed | Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy |
title_short | Whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy |
title_sort | whole-exome sequencing analysis in a case of primary congenital glaucoma due to the partial uniparental isodisomy |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576475/ https://www.ncbi.nlm.nih.gov/pubmed/36239105 http://dx.doi.org/10.5808/gi.21044 |
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