Cargando…

A systemic study on the vulnerability and fatality of prostate cancer patients towards COVID-19 through analysis of the TMPRSS2, CXCL10 and their co-expressed genes

A pandemic of respiratory disease named coronavirus disease 2019 (COVID-19) is caused by a novel coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). It is reported prostate cancer patients are susceptible to COVID-19 infection. To understand the possible causes of prostate can...

Descripción completa

Detalles Bibliográficos
Autores principales: Raza, Md. Thosif, Mizan, Shagufta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korea Genome Organization 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576478/
https://www.ncbi.nlm.nih.gov/pubmed/36239108
http://dx.doi.org/10.5808/gi.22012
_version_ 1784811537282629632
author Raza, Md. Thosif
Mizan, Shagufta
author_facet Raza, Md. Thosif
Mizan, Shagufta
author_sort Raza, Md. Thosif
collection PubMed
description A pandemic of respiratory disease named coronavirus disease 2019 (COVID-19) is caused by a novel coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). It is reported prostate cancer patients are susceptible to COVID-19 infection. To understand the possible causes of prostate cancer patients' increased vulnerability and mortality from COVID-19 infection, we focused on the two most important agents, transmembrane protease serine subtype 2 (TMPRSS2) and the C-X-C motif 10 (CXCL10). When SARS-CoV-2 binds to the host cell via S protein‒angiotensin-converting enzyme-2 receptor interaction, TMPRSS2 contributes in the proteolytic cleavage of the S protein, allowing the viral and cellular membranes to fuse. CXCL10 is a cytokine found in elevated level in both COVID-19 and cancer-causing cytokine storm. We discovered that TMPRSS2 and CXCL10 are overexpressed in prostate cancer and COVID-19 using the UALCAN and GEPIA2 datasets. The functional importance of TMPRSS2 and CXCL10 in prostate cancer development was then determined by analyzing the frequency of genetic changes in their amino acid sequences using the cBioPortal online portal. Finally, we used the PANTHER database to examine the pathology of the targeted genes. We observed that TMPRSS2 and CXCL10, together with their often co-expressed genes, are important in the binding activity and immune responses in prostate cancer and COVID-19 infection, respectively. Finally, we found that TMPRSS2 and CXCL10 are two putative biomarkers responsible for the increased vulnerability and fatality of prostate cancer patients to COVID-19.
format Online
Article
Text
id pubmed-9576478
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Korea Genome Organization
record_format MEDLINE/PubMed
spelling pubmed-95764782022-10-19 A systemic study on the vulnerability and fatality of prostate cancer patients towards COVID-19 through analysis of the TMPRSS2, CXCL10 and their co-expressed genes Raza, Md. Thosif Mizan, Shagufta Genomics Inform Original Article A pandemic of respiratory disease named coronavirus disease 2019 (COVID-19) is caused by a novel coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). It is reported prostate cancer patients are susceptible to COVID-19 infection. To understand the possible causes of prostate cancer patients' increased vulnerability and mortality from COVID-19 infection, we focused on the two most important agents, transmembrane protease serine subtype 2 (TMPRSS2) and the C-X-C motif 10 (CXCL10). When SARS-CoV-2 binds to the host cell via S protein‒angiotensin-converting enzyme-2 receptor interaction, TMPRSS2 contributes in the proteolytic cleavage of the S protein, allowing the viral and cellular membranes to fuse. CXCL10 is a cytokine found in elevated level in both COVID-19 and cancer-causing cytokine storm. We discovered that TMPRSS2 and CXCL10 are overexpressed in prostate cancer and COVID-19 using the UALCAN and GEPIA2 datasets. The functional importance of TMPRSS2 and CXCL10 in prostate cancer development was then determined by analyzing the frequency of genetic changes in their amino acid sequences using the cBioPortal online portal. Finally, we used the PANTHER database to examine the pathology of the targeted genes. We observed that TMPRSS2 and CXCL10, together with their often co-expressed genes, are important in the binding activity and immune responses in prostate cancer and COVID-19 infection, respectively. Finally, we found that TMPRSS2 and CXCL10 are two putative biomarkers responsible for the increased vulnerability and fatality of prostate cancer patients to COVID-19. Korea Genome Organization 2022-09-30 /pmc/articles/PMC9576478/ /pubmed/36239108 http://dx.doi.org/10.5808/gi.22012 Text en (c) 2022, Korea Genome Organization https://creativecommons.org/licenses/by/4.0/(CC) This is an open-access article distributed under the terms of the Creative Commons Attribution license(https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Raza, Md. Thosif
Mizan, Shagufta
A systemic study on the vulnerability and fatality of prostate cancer patients towards COVID-19 through analysis of the TMPRSS2, CXCL10 and their co-expressed genes
title A systemic study on the vulnerability and fatality of prostate cancer patients towards COVID-19 through analysis of the TMPRSS2, CXCL10 and their co-expressed genes
title_full A systemic study on the vulnerability and fatality of prostate cancer patients towards COVID-19 through analysis of the TMPRSS2, CXCL10 and their co-expressed genes
title_fullStr A systemic study on the vulnerability and fatality of prostate cancer patients towards COVID-19 through analysis of the TMPRSS2, CXCL10 and their co-expressed genes
title_full_unstemmed A systemic study on the vulnerability and fatality of prostate cancer patients towards COVID-19 through analysis of the TMPRSS2, CXCL10 and their co-expressed genes
title_short A systemic study on the vulnerability and fatality of prostate cancer patients towards COVID-19 through analysis of the TMPRSS2, CXCL10 and their co-expressed genes
title_sort systemic study on the vulnerability and fatality of prostate cancer patients towards covid-19 through analysis of the tmprss2, cxcl10 and their co-expressed genes
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576478/
https://www.ncbi.nlm.nih.gov/pubmed/36239108
http://dx.doi.org/10.5808/gi.22012
work_keys_str_mv AT razamdthosif asystemicstudyonthevulnerabilityandfatalityofprostatecancerpatientstowardscovid19throughanalysisofthetmprss2cxcl10andtheircoexpressedgenes
AT mizanshagufta asystemicstudyonthevulnerabilityandfatalityofprostatecancerpatientstowardscovid19throughanalysisofthetmprss2cxcl10andtheircoexpressedgenes
AT razamdthosif systemicstudyonthevulnerabilityandfatalityofprostatecancerpatientstowardscovid19throughanalysisofthetmprss2cxcl10andtheircoexpressedgenes
AT mizanshagufta systemicstudyonthevulnerabilityandfatalityofprostatecancerpatientstowardscovid19throughanalysisofthetmprss2cxcl10andtheircoexpressedgenes