Cargando…

Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium

Proteomic studies on cyanobacterial biofilms can be an effective approach to unravel metabolic pathways involved in biofilm formation and, consequently, obtain more efficient biofouling control strategies. Biofilm development by the filamentous cyanobacterium Toxifilum sp. LEGE 06021 was evaluated o...

Descripción completa

Detalles Bibliográficos
Autores principales: Romeu, Maria J., Domínguez-Pérez, Dany, Almeida, Daniela, Morais, João, Araújo, Mário J., Osório, Hugo, Campos, Alexandre, Vasconcelos, Vítor, Mergulhão, Filipe J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576798/
https://www.ncbi.nlm.nih.gov/pubmed/36253388
http://dx.doi.org/10.1038/s41522-022-00340-w
_version_ 1784811612007301120
author Romeu, Maria J.
Domínguez-Pérez, Dany
Almeida, Daniela
Morais, João
Araújo, Mário J.
Osório, Hugo
Campos, Alexandre
Vasconcelos, Vítor
Mergulhão, Filipe J.
author_facet Romeu, Maria J.
Domínguez-Pérez, Dany
Almeida, Daniela
Morais, João
Araújo, Mário J.
Osório, Hugo
Campos, Alexandre
Vasconcelos, Vítor
Mergulhão, Filipe J.
author_sort Romeu, Maria J.
collection PubMed
description Proteomic studies on cyanobacterial biofilms can be an effective approach to unravel metabolic pathways involved in biofilm formation and, consequently, obtain more efficient biofouling control strategies. Biofilm development by the filamentous cyanobacterium Toxifilum sp. LEGE 06021 was evaluated on different surfaces, glass and perspex, and at two significant shear rates for marine environments (4 s(−1) and 40 s(−1)). Higher biofilm development was observed at 4 s(−1). Overall, about 1877 proteins were identified, and differences in proteome were more noticeable between hydrodynamic conditions than those found between surfaces. Twenty Differentially Expressed Proteins (DEPs) were found between 4 s(−1) vs. 40 s(−1). On glass, some of these DEPs include phage tail proteins, a carotenoid protein, cyanophynase glutathione-dependent formaldehyde dehydrogenase, and the MoaD/ThiS family protein, while on perspex, DEPs include transketolase, dihydroxy-acid dehydratase, iron ABC transporter substrate-binding protein and protein NusG. This study contributes to developing a standardized protocol for proteomic analysis of filamentous cyanobacterial biofilms. This kind of proteomic analysis can also be useful for different research fields, given the broad spectrum of promising secondary metabolites and added-value compounds produced by cyanobacteria, as well as for the development of new antibiofilm strategies.
format Online
Article
Text
id pubmed-9576798
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-95767982022-10-19 Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium Romeu, Maria J. Domínguez-Pérez, Dany Almeida, Daniela Morais, João Araújo, Mário J. Osório, Hugo Campos, Alexandre Vasconcelos, Vítor Mergulhão, Filipe J. NPJ Biofilms Microbiomes Article Proteomic studies on cyanobacterial biofilms can be an effective approach to unravel metabolic pathways involved in biofilm formation and, consequently, obtain more efficient biofouling control strategies. Biofilm development by the filamentous cyanobacterium Toxifilum sp. LEGE 06021 was evaluated on different surfaces, glass and perspex, and at two significant shear rates for marine environments (4 s(−1) and 40 s(−1)). Higher biofilm development was observed at 4 s(−1). Overall, about 1877 proteins were identified, and differences in proteome were more noticeable between hydrodynamic conditions than those found between surfaces. Twenty Differentially Expressed Proteins (DEPs) were found between 4 s(−1) vs. 40 s(−1). On glass, some of these DEPs include phage tail proteins, a carotenoid protein, cyanophynase glutathione-dependent formaldehyde dehydrogenase, and the MoaD/ThiS family protein, while on perspex, DEPs include transketolase, dihydroxy-acid dehydratase, iron ABC transporter substrate-binding protein and protein NusG. This study contributes to developing a standardized protocol for proteomic analysis of filamentous cyanobacterial biofilms. This kind of proteomic analysis can also be useful for different research fields, given the broad spectrum of promising secondary metabolites and added-value compounds produced by cyanobacteria, as well as for the development of new antibiofilm strategies. Nature Publishing Group UK 2022-10-17 /pmc/articles/PMC9576798/ /pubmed/36253388 http://dx.doi.org/10.1038/s41522-022-00340-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Romeu, Maria J.
Domínguez-Pérez, Dany
Almeida, Daniela
Morais, João
Araújo, Mário J.
Osório, Hugo
Campos, Alexandre
Vasconcelos, Vítor
Mergulhão, Filipe J.
Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium
title Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium
title_full Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium
title_fullStr Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium
title_full_unstemmed Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium
title_short Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium
title_sort hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576798/
https://www.ncbi.nlm.nih.gov/pubmed/36253388
http://dx.doi.org/10.1038/s41522-022-00340-w
work_keys_str_mv AT romeumariaj hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium
AT dominguezperezdany hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium
AT almeidadaniela hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium
AT moraisjoao hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium
AT araujomarioj hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium
AT osoriohugo hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium
AT camposalexandre hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium
AT vasconcelosvitor hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium
AT mergulhaofilipej hydrodynamicconditionsaffecttheproteomicprofileofmarinebiofilmsformedbyfilamentouscyanobacterium