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Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium
Proteomic studies on cyanobacterial biofilms can be an effective approach to unravel metabolic pathways involved in biofilm formation and, consequently, obtain more efficient biofouling control strategies. Biofilm development by the filamentous cyanobacterium Toxifilum sp. LEGE 06021 was evaluated o...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576798/ https://www.ncbi.nlm.nih.gov/pubmed/36253388 http://dx.doi.org/10.1038/s41522-022-00340-w |
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author | Romeu, Maria J. Domínguez-Pérez, Dany Almeida, Daniela Morais, João Araújo, Mário J. Osório, Hugo Campos, Alexandre Vasconcelos, Vítor Mergulhão, Filipe J. |
author_facet | Romeu, Maria J. Domínguez-Pérez, Dany Almeida, Daniela Morais, João Araújo, Mário J. Osório, Hugo Campos, Alexandre Vasconcelos, Vítor Mergulhão, Filipe J. |
author_sort | Romeu, Maria J. |
collection | PubMed |
description | Proteomic studies on cyanobacterial biofilms can be an effective approach to unravel metabolic pathways involved in biofilm formation and, consequently, obtain more efficient biofouling control strategies. Biofilm development by the filamentous cyanobacterium Toxifilum sp. LEGE 06021 was evaluated on different surfaces, glass and perspex, and at two significant shear rates for marine environments (4 s(−1) and 40 s(−1)). Higher biofilm development was observed at 4 s(−1). Overall, about 1877 proteins were identified, and differences in proteome were more noticeable between hydrodynamic conditions than those found between surfaces. Twenty Differentially Expressed Proteins (DEPs) were found between 4 s(−1) vs. 40 s(−1). On glass, some of these DEPs include phage tail proteins, a carotenoid protein, cyanophynase glutathione-dependent formaldehyde dehydrogenase, and the MoaD/ThiS family protein, while on perspex, DEPs include transketolase, dihydroxy-acid dehydratase, iron ABC transporter substrate-binding protein and protein NusG. This study contributes to developing a standardized protocol for proteomic analysis of filamentous cyanobacterial biofilms. This kind of proteomic analysis can also be useful for different research fields, given the broad spectrum of promising secondary metabolites and added-value compounds produced by cyanobacteria, as well as for the development of new antibiofilm strategies. |
format | Online Article Text |
id | pubmed-9576798 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-95767982022-10-19 Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium Romeu, Maria J. Domínguez-Pérez, Dany Almeida, Daniela Morais, João Araújo, Mário J. Osório, Hugo Campos, Alexandre Vasconcelos, Vítor Mergulhão, Filipe J. NPJ Biofilms Microbiomes Article Proteomic studies on cyanobacterial biofilms can be an effective approach to unravel metabolic pathways involved in biofilm formation and, consequently, obtain more efficient biofouling control strategies. Biofilm development by the filamentous cyanobacterium Toxifilum sp. LEGE 06021 was evaluated on different surfaces, glass and perspex, and at two significant shear rates for marine environments (4 s(−1) and 40 s(−1)). Higher biofilm development was observed at 4 s(−1). Overall, about 1877 proteins were identified, and differences in proteome were more noticeable between hydrodynamic conditions than those found between surfaces. Twenty Differentially Expressed Proteins (DEPs) were found between 4 s(−1) vs. 40 s(−1). On glass, some of these DEPs include phage tail proteins, a carotenoid protein, cyanophynase glutathione-dependent formaldehyde dehydrogenase, and the MoaD/ThiS family protein, while on perspex, DEPs include transketolase, dihydroxy-acid dehydratase, iron ABC transporter substrate-binding protein and protein NusG. This study contributes to developing a standardized protocol for proteomic analysis of filamentous cyanobacterial biofilms. This kind of proteomic analysis can also be useful for different research fields, given the broad spectrum of promising secondary metabolites and added-value compounds produced by cyanobacteria, as well as for the development of new antibiofilm strategies. Nature Publishing Group UK 2022-10-17 /pmc/articles/PMC9576798/ /pubmed/36253388 http://dx.doi.org/10.1038/s41522-022-00340-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Romeu, Maria J. Domínguez-Pérez, Dany Almeida, Daniela Morais, João Araújo, Mário J. Osório, Hugo Campos, Alexandre Vasconcelos, Vítor Mergulhão, Filipe J. Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium |
title | Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium |
title_full | Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium |
title_fullStr | Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium |
title_full_unstemmed | Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium |
title_short | Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium |
title_sort | hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576798/ https://www.ncbi.nlm.nih.gov/pubmed/36253388 http://dx.doi.org/10.1038/s41522-022-00340-w |
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