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COVID-19 forecasting using shifted Gaussian Mixture Model with similarity-based estimation

The COVID-19 pandemic has caused a pronounced disturbance in the social environments and economies of many countries worldwide. Credible forecasting methods to predict the pandemic’s progress can allow countries to control the disease’s spread and decrease the number of severe cases. This study pres...

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Autores principales: Külah, Emre, Çetinkaya, Yusuf Mücahit, Özer, Arif Görkem, Alemdar, Hande
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576929/
https://www.ncbi.nlm.nih.gov/pubmed/36277990
http://dx.doi.org/10.1016/j.eswa.2022.119034
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author Külah, Emre
Çetinkaya, Yusuf Mücahit
Özer, Arif Görkem
Alemdar, Hande
author_facet Külah, Emre
Çetinkaya, Yusuf Mücahit
Özer, Arif Görkem
Alemdar, Hande
author_sort Külah, Emre
collection PubMed
description The COVID-19 pandemic has caused a pronounced disturbance in the social environments and economies of many countries worldwide. Credible forecasting methods to predict the pandemic’s progress can allow countries to control the disease’s spread and decrease the number of severe cases. This study presents a novel approach, called the Shifted Gaussian Mixture Model with Similarity-based Estimation (SGSE), that forecasts the future of a specific country’s daily new case values by examining similar behavior in other countries. The model uses daily new case values collected since the pandemic began and finds countries with similar trends using a specific time offset. The daily new case values data between the first day and [Formula: see text] th day are transformed by employing the Gaussian Mixture Model (GMM) and, subsequently, a new vector of features is obtained for each country. Using these feature vectors, countries that show similar statistics in the past are found for any forecasted country. The future of the corresponding country is forecasted by taking the mean of the time-series plots after the offset points of similar countries are calculated. A brand new metric called a trend similarity score, which calculates the similarity between forecasted and actual values is also presented in this study. While the SGSE trend similarity score median varies between 0.903–0.947, based on the selection of the distance metric, the ARIMA model yields only 0.642. The performance of the SGSE was compared in seven European countries using four different public projects submitted to The European COVID-19 Forecast Hub. The SGSE gives the most accurate forecasts compared to all other models. The test sets’ results show that trends and plateaus are predicted accurately for many countries.
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spelling pubmed-95769292022-10-18 COVID-19 forecasting using shifted Gaussian Mixture Model with similarity-based estimation Külah, Emre Çetinkaya, Yusuf Mücahit Özer, Arif Görkem Alemdar, Hande Expert Syst Appl Article The COVID-19 pandemic has caused a pronounced disturbance in the social environments and economies of many countries worldwide. Credible forecasting methods to predict the pandemic’s progress can allow countries to control the disease’s spread and decrease the number of severe cases. This study presents a novel approach, called the Shifted Gaussian Mixture Model with Similarity-based Estimation (SGSE), that forecasts the future of a specific country’s daily new case values by examining similar behavior in other countries. The model uses daily new case values collected since the pandemic began and finds countries with similar trends using a specific time offset. The daily new case values data between the first day and [Formula: see text] th day are transformed by employing the Gaussian Mixture Model (GMM) and, subsequently, a new vector of features is obtained for each country. Using these feature vectors, countries that show similar statistics in the past are found for any forecasted country. The future of the corresponding country is forecasted by taking the mean of the time-series plots after the offset points of similar countries are calculated. A brand new metric called a trend similarity score, which calculates the similarity between forecasted and actual values is also presented in this study. While the SGSE trend similarity score median varies between 0.903–0.947, based on the selection of the distance metric, the ARIMA model yields only 0.642. The performance of the SGSE was compared in seven European countries using four different public projects submitted to The European COVID-19 Forecast Hub. The SGSE gives the most accurate forecasts compared to all other models. The test sets’ results show that trends and plateaus are predicted accurately for many countries. Elsevier Ltd. 2023-03-15 2022-10-18 /pmc/articles/PMC9576929/ /pubmed/36277990 http://dx.doi.org/10.1016/j.eswa.2022.119034 Text en © 2022 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Külah, Emre
Çetinkaya, Yusuf Mücahit
Özer, Arif Görkem
Alemdar, Hande
COVID-19 forecasting using shifted Gaussian Mixture Model with similarity-based estimation
title COVID-19 forecasting using shifted Gaussian Mixture Model with similarity-based estimation
title_full COVID-19 forecasting using shifted Gaussian Mixture Model with similarity-based estimation
title_fullStr COVID-19 forecasting using shifted Gaussian Mixture Model with similarity-based estimation
title_full_unstemmed COVID-19 forecasting using shifted Gaussian Mixture Model with similarity-based estimation
title_short COVID-19 forecasting using shifted Gaussian Mixture Model with similarity-based estimation
title_sort covid-19 forecasting using shifted gaussian mixture model with similarity-based estimation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9576929/
https://www.ncbi.nlm.nih.gov/pubmed/36277990
http://dx.doi.org/10.1016/j.eswa.2022.119034
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