Cargando…

First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae)

Syneilesis aconitifolia is an herbaceous perennial of the Asteraceae family native to forests in China, Korea, Japan, and eastern Russia. In Korea, the young leaves of the plant are edible and the extract is known to have antitumor effects. The length of the complete plastome was found to be 150,773...

Descripción completa

Detalles Bibliográficos
Autores principales: Kim, Sang-Chul, Ha, Young-Ho, Choi, Kyung, Kim, Hyuk-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9578491/
https://www.ncbi.nlm.nih.gov/pubmed/36267669
http://dx.doi.org/10.1080/23802359.2022.2126734
_version_ 1784811975486734336
author Kim, Sang-Chul
Ha, Young-Ho
Choi, Kyung
Kim, Hyuk-Jin
author_facet Kim, Sang-Chul
Ha, Young-Ho
Choi, Kyung
Kim, Hyuk-Jin
author_sort Kim, Sang-Chul
collection PubMed
description Syneilesis aconitifolia is an herbaceous perennial of the Asteraceae family native to forests in China, Korea, Japan, and eastern Russia. In Korea, the young leaves of the plant are edible and the extract is known to have antitumor effects. The length of the complete plastome was found to be 150,773 bp, including 130 genes, consisting of 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The assembled plastome showed typical structure and gene content of the angiosperm plastome, which includes two inverted repeats (IR) regions of 24839 bp, a large single copy (LSC) region of 82911 bp, and a small single-copy (SSC) region of 18184 bp. The total G/C content in the S. aconitifolia plastome was 37.5%. The maximum likelihood (ML) phylogenetic tree strongly supports that S. aconitifolia is closely related to the hosts of Ligularia fischeri. This study reports the first complete chloroplast genome of the genus Syneilesis and will contribute to the phylogenetics of the family Asteraceae.
format Online
Article
Text
id pubmed-9578491
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-95784912022-10-19 First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae) Kim, Sang-Chul Ha, Young-Ho Choi, Kyung Kim, Hyuk-Jin Mitochondrial DNA B Resour Plastome Announcement Syneilesis aconitifolia is an herbaceous perennial of the Asteraceae family native to forests in China, Korea, Japan, and eastern Russia. In Korea, the young leaves of the plant are edible and the extract is known to have antitumor effects. The length of the complete plastome was found to be 150,773 bp, including 130 genes, consisting of 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The assembled plastome showed typical structure and gene content of the angiosperm plastome, which includes two inverted repeats (IR) regions of 24839 bp, a large single copy (LSC) region of 82911 bp, and a small single-copy (SSC) region of 18184 bp. The total G/C content in the S. aconitifolia plastome was 37.5%. The maximum likelihood (ML) phylogenetic tree strongly supports that S. aconitifolia is closely related to the hosts of Ligularia fischeri. This study reports the first complete chloroplast genome of the genus Syneilesis and will contribute to the phylogenetics of the family Asteraceae. Taylor & Francis 2022-10-12 /pmc/articles/PMC9578491/ /pubmed/36267669 http://dx.doi.org/10.1080/23802359.2022.2126734 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Kim, Sang-Chul
Ha, Young-Ho
Choi, Kyung
Kim, Hyuk-Jin
First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae)
title First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae)
title_full First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae)
title_fullStr First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae)
title_full_unstemmed First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae)
title_short First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae)
title_sort first record of the complete chloroplast genome of syneilesis aconitifolia (asteraceae)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9578491/
https://www.ncbi.nlm.nih.gov/pubmed/36267669
http://dx.doi.org/10.1080/23802359.2022.2126734
work_keys_str_mv AT kimsangchul firstrecordofthecompletechloroplastgenomeofsyneilesisaconitifoliaasteraceae
AT hayoungho firstrecordofthecompletechloroplastgenomeofsyneilesisaconitifoliaasteraceae
AT choikyung firstrecordofthecompletechloroplastgenomeofsyneilesisaconitifoliaasteraceae
AT kimhyukjin firstrecordofthecompletechloroplastgenomeofsyneilesisaconitifoliaasteraceae