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First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae)
Syneilesis aconitifolia is an herbaceous perennial of the Asteraceae family native to forests in China, Korea, Japan, and eastern Russia. In Korea, the young leaves of the plant are edible and the extract is known to have antitumor effects. The length of the complete plastome was found to be 150,773...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9578491/ https://www.ncbi.nlm.nih.gov/pubmed/36267669 http://dx.doi.org/10.1080/23802359.2022.2126734 |
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author | Kim, Sang-Chul Ha, Young-Ho Choi, Kyung Kim, Hyuk-Jin |
author_facet | Kim, Sang-Chul Ha, Young-Ho Choi, Kyung Kim, Hyuk-Jin |
author_sort | Kim, Sang-Chul |
collection | PubMed |
description | Syneilesis aconitifolia is an herbaceous perennial of the Asteraceae family native to forests in China, Korea, Japan, and eastern Russia. In Korea, the young leaves of the plant are edible and the extract is known to have antitumor effects. The length of the complete plastome was found to be 150,773 bp, including 130 genes, consisting of 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The assembled plastome showed typical structure and gene content of the angiosperm plastome, which includes two inverted repeats (IR) regions of 24839 bp, a large single copy (LSC) region of 82911 bp, and a small single-copy (SSC) region of 18184 bp. The total G/C content in the S. aconitifolia plastome was 37.5%. The maximum likelihood (ML) phylogenetic tree strongly supports that S. aconitifolia is closely related to the hosts of Ligularia fischeri. This study reports the first complete chloroplast genome of the genus Syneilesis and will contribute to the phylogenetics of the family Asteraceae. |
format | Online Article Text |
id | pubmed-9578491 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-95784912022-10-19 First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae) Kim, Sang-Chul Ha, Young-Ho Choi, Kyung Kim, Hyuk-Jin Mitochondrial DNA B Resour Plastome Announcement Syneilesis aconitifolia is an herbaceous perennial of the Asteraceae family native to forests in China, Korea, Japan, and eastern Russia. In Korea, the young leaves of the plant are edible and the extract is known to have antitumor effects. The length of the complete plastome was found to be 150,773 bp, including 130 genes, consisting of 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The assembled plastome showed typical structure and gene content of the angiosperm plastome, which includes two inverted repeats (IR) regions of 24839 bp, a large single copy (LSC) region of 82911 bp, and a small single-copy (SSC) region of 18184 bp. The total G/C content in the S. aconitifolia plastome was 37.5%. The maximum likelihood (ML) phylogenetic tree strongly supports that S. aconitifolia is closely related to the hosts of Ligularia fischeri. This study reports the first complete chloroplast genome of the genus Syneilesis and will contribute to the phylogenetics of the family Asteraceae. Taylor & Francis 2022-10-12 /pmc/articles/PMC9578491/ /pubmed/36267669 http://dx.doi.org/10.1080/23802359.2022.2126734 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Kim, Sang-Chul Ha, Young-Ho Choi, Kyung Kim, Hyuk-Jin First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae) |
title | First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae) |
title_full | First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae) |
title_fullStr | First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae) |
title_full_unstemmed | First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae) |
title_short | First record of the complete chloroplast genome of Syneilesis aconitifolia (Asteraceae) |
title_sort | first record of the complete chloroplast genome of syneilesis aconitifolia (asteraceae) |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9578491/ https://www.ncbi.nlm.nih.gov/pubmed/36267669 http://dx.doi.org/10.1080/23802359.2022.2126734 |
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