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A one-dimensional three-state run-and-tumble model with a ‘cell cycle’
ABSTRACT: We study a one-dimensional three-state run-and-tumble model motivated by the bacterium Caulobacter crescentus which displays a cell cycle between two non-proliferating mobile phases and a proliferating sedentary phase. Our model implements kinetic transitions between the two mobile and one...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579107/ https://www.ncbi.nlm.nih.gov/pubmed/36258055 http://dx.doi.org/10.1140/epje/s10189-022-00238-7 |
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author | Breoni, Davide Schwarzendahl, Fabian Jan Blossey, Ralf Löwen, Hartmut |
author_facet | Breoni, Davide Schwarzendahl, Fabian Jan Blossey, Ralf Löwen, Hartmut |
author_sort | Breoni, Davide |
collection | PubMed |
description | ABSTRACT: We study a one-dimensional three-state run-and-tumble model motivated by the bacterium Caulobacter crescentus which displays a cell cycle between two non-proliferating mobile phases and a proliferating sedentary phase. Our model implements kinetic transitions between the two mobile and one sedentary states described in terms of their number densities, where mobility is allowed with different running speeds in forward and backward direction. We start by analyzing the stationary states of the system and compute the mean and squared-displacements for the distribution of all cells, as well as for the number density of settled cells. The latter displays a surprising super-ballistic scaling [Formula: see text] at early times. Including repulsive and attractive interactions between the mobile cell populations and the settled cells, we explore the stability of the system and employ numerical methods to study structure formation in the fully nonlinear system. We find traveling waves of bacteria, whose occurrence is quantified in a non-equilibrium state diagram. GRAPICAL ABSTRACT: [Image: see text] |
format | Online Article Text |
id | pubmed-9579107 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-95791072022-10-20 A one-dimensional three-state run-and-tumble model with a ‘cell cycle’ Breoni, Davide Schwarzendahl, Fabian Jan Blossey, Ralf Löwen, Hartmut Eur Phys J E Soft Matter Regular Article - Living Systems ABSTRACT: We study a one-dimensional three-state run-and-tumble model motivated by the bacterium Caulobacter crescentus which displays a cell cycle between two non-proliferating mobile phases and a proliferating sedentary phase. Our model implements kinetic transitions between the two mobile and one sedentary states described in terms of their number densities, where mobility is allowed with different running speeds in forward and backward direction. We start by analyzing the stationary states of the system and compute the mean and squared-displacements for the distribution of all cells, as well as for the number density of settled cells. The latter displays a surprising super-ballistic scaling [Formula: see text] at early times. Including repulsive and attractive interactions between the mobile cell populations and the settled cells, we explore the stability of the system and employ numerical methods to study structure formation in the fully nonlinear system. We find traveling waves of bacteria, whose occurrence is quantified in a non-equilibrium state diagram. GRAPICAL ABSTRACT: [Image: see text] Springer Berlin Heidelberg 2022-10-19 2022 /pmc/articles/PMC9579107/ /pubmed/36258055 http://dx.doi.org/10.1140/epje/s10189-022-00238-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Regular Article - Living Systems Breoni, Davide Schwarzendahl, Fabian Jan Blossey, Ralf Löwen, Hartmut A one-dimensional three-state run-and-tumble model with a ‘cell cycle’ |
title | A one-dimensional three-state run-and-tumble model with a ‘cell cycle’ |
title_full | A one-dimensional three-state run-and-tumble model with a ‘cell cycle’ |
title_fullStr | A one-dimensional three-state run-and-tumble model with a ‘cell cycle’ |
title_full_unstemmed | A one-dimensional three-state run-and-tumble model with a ‘cell cycle’ |
title_short | A one-dimensional three-state run-and-tumble model with a ‘cell cycle’ |
title_sort | one-dimensional three-state run-and-tumble model with a ‘cell cycle’ |
topic | Regular Article - Living Systems |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579107/ https://www.ncbi.nlm.nih.gov/pubmed/36258055 http://dx.doi.org/10.1140/epje/s10189-022-00238-7 |
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