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TriDFusion (3DF) image viewer

BACKGROUND: An open-source, extensible medical viewing platform is described, called the TriDFusion image viewer (3DF). The 3DF addresses many broad unmet needs in nuclear medicine research; it provides a viewer with several tools not available in commercial nuclear medicine workstations, yet invalu...

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Autores principales: Lafontaine, Daniel, Schmidtlein, C. Ross, Kirov, Assen, Reddy, Ryan P., Krebs, Simone, Schöder, Heiko, Humm, John L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579267/
https://www.ncbi.nlm.nih.gov/pubmed/36258098
http://dx.doi.org/10.1186/s40658-022-00501-y
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author Lafontaine, Daniel
Schmidtlein, C. Ross
Kirov, Assen
Reddy, Ryan P.
Krebs, Simone
Schöder, Heiko
Humm, John L.
author_facet Lafontaine, Daniel
Schmidtlein, C. Ross
Kirov, Assen
Reddy, Ryan P.
Krebs, Simone
Schöder, Heiko
Humm, John L.
author_sort Lafontaine, Daniel
collection PubMed
description BACKGROUND: An open-source, extensible medical viewing platform is described, called the TriDFusion image viewer (3DF). The 3DF addresses many broad unmet needs in nuclear medicine research; it provides a viewer with several tools not available in commercial nuclear medicine workstations, yet invaluable for imaging in research studies. RESULTS: The 3DF includes an image integration platform to register images from multiple imaging modalities together with delineated volumes of interest (VOIs), structures and dose distributions. It can process images from different vendors’ systems and is therefore vendor neutral. The 3DF also provides a convenient tool for performing multi-modality image analysis and fusion. The functional components currently being distributed is open-source code that includes: (1) a high quality viewer that can display axial, coronal, and sagittal tomographic images, maximum intensity projection images, structure contours, and isointensity contour lines or dose colorwash, (2) multi-image fusion allowing multiple images to be fused with VOI and dose distributions, (3) a suite of segmentation tools to edit and/or create tumor and organ VOIs, (4) dosimetry tools for several radioisotopes, (5) clinical tools for correcting acquisition errors, including patient orientation, and (6) the ability to save the resultant image and VOI as DICOM files or to export the numerical results as comma separated values files. Because the code is written in MATLAB™, it is highly readable and is easier for the coder to make changes compared to languages such as C or C++. In what follows, we describe the content of the new TriDFusion (3DF) image viewer software platform using examples of a number of clinical research workflows. Such examples vary in complexity but illustrate the main attributes of the software. CONCLUSIONS: In summary, 3DF provides a powerful, convenient, easy-to-use suite of open-source imaging research tools for the nuclear medicine community that allows physicians, medical physicists, and academic researchers to display, manipulate, and analyze images.
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spelling pubmed-95792672022-10-20 TriDFusion (3DF) image viewer Lafontaine, Daniel Schmidtlein, C. Ross Kirov, Assen Reddy, Ryan P. Krebs, Simone Schöder, Heiko Humm, John L. EJNMMI Phys Commentary BACKGROUND: An open-source, extensible medical viewing platform is described, called the TriDFusion image viewer (3DF). The 3DF addresses many broad unmet needs in nuclear medicine research; it provides a viewer with several tools not available in commercial nuclear medicine workstations, yet invaluable for imaging in research studies. RESULTS: The 3DF includes an image integration platform to register images from multiple imaging modalities together with delineated volumes of interest (VOIs), structures and dose distributions. It can process images from different vendors’ systems and is therefore vendor neutral. The 3DF also provides a convenient tool for performing multi-modality image analysis and fusion. The functional components currently being distributed is open-source code that includes: (1) a high quality viewer that can display axial, coronal, and sagittal tomographic images, maximum intensity projection images, structure contours, and isointensity contour lines or dose colorwash, (2) multi-image fusion allowing multiple images to be fused with VOI and dose distributions, (3) a suite of segmentation tools to edit and/or create tumor and organ VOIs, (4) dosimetry tools for several radioisotopes, (5) clinical tools for correcting acquisition errors, including patient orientation, and (6) the ability to save the resultant image and VOI as DICOM files or to export the numerical results as comma separated values files. Because the code is written in MATLAB™, it is highly readable and is easier for the coder to make changes compared to languages such as C or C++. In what follows, we describe the content of the new TriDFusion (3DF) image viewer software platform using examples of a number of clinical research workflows. Such examples vary in complexity but illustrate the main attributes of the software. CONCLUSIONS: In summary, 3DF provides a powerful, convenient, easy-to-use suite of open-source imaging research tools for the nuclear medicine community that allows physicians, medical physicists, and academic researchers to display, manipulate, and analyze images. Springer International Publishing 2022-10-18 /pmc/articles/PMC9579267/ /pubmed/36258098 http://dx.doi.org/10.1186/s40658-022-00501-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Commentary
Lafontaine, Daniel
Schmidtlein, C. Ross
Kirov, Assen
Reddy, Ryan P.
Krebs, Simone
Schöder, Heiko
Humm, John L.
TriDFusion (3DF) image viewer
title TriDFusion (3DF) image viewer
title_full TriDFusion (3DF) image viewer
title_fullStr TriDFusion (3DF) image viewer
title_full_unstemmed TriDFusion (3DF) image viewer
title_short TriDFusion (3DF) image viewer
title_sort tridfusion (3df) image viewer
topic Commentary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579267/
https://www.ncbi.nlm.nih.gov/pubmed/36258098
http://dx.doi.org/10.1186/s40658-022-00501-y
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