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A novel analytical framework for risk stratification of real‐world data using machine learning: A small cell lung cancer study
In recent studies, small cell lung cancer (SCLC) treatment guidelines based on Veterans’ Administration Lung Study Group limited/extensive disease staging and resulted in broad and inseparable prognostic subgroups. Evidence suggests that the eight versions of tumor, node, and metastasis (TNM) stagin...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579402/ https://www.ncbi.nlm.nih.gov/pubmed/35856401 http://dx.doi.org/10.1111/cts.13371 |
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author | Marzano, Luca Darwich, Adam S. Tendler, Salomon Dan, Asaf Lewensohn, Rolf De Petris, Luigi Raghothama, Jayanth Meijer, Sebastiaan |
author_facet | Marzano, Luca Darwich, Adam S. Tendler, Salomon Dan, Asaf Lewensohn, Rolf De Petris, Luigi Raghothama, Jayanth Meijer, Sebastiaan |
author_sort | Marzano, Luca |
collection | PubMed |
description | In recent studies, small cell lung cancer (SCLC) treatment guidelines based on Veterans’ Administration Lung Study Group limited/extensive disease staging and resulted in broad and inseparable prognostic subgroups. Evidence suggests that the eight versions of tumor, node, and metastasis (TNM) staging can play an important role to address this issue. The aim of the present study was to improve the detection of prognostic subgroups from a real‐word data (RWD) cohort of patients and analyze their patterns using a development pipeline with thoracic oncologists and machine learning methods. The method detected subgroups of patients informing unsupervised learning (partition around medoids) including the impact of covariates on prognosis (Cox regression and random survival forest). An analysis was carried out using patients with SCLC (n = 636) with stage IIIA–IVB according to TNM classification. The analysis yielded k = 7 compacted and well‐separated clusters of patients. Performance status (Eastern Cooperative Oncology Group‐Performance Status), lactate dehydrogenase, spreading of metastasis, cancer stage, and CRP were the baselines that characterized the subgroups. The selected clustering method outperformed standard clustering techniques, which were not capable of detecting meaningful subgroups. From the analysis of cluster treatment decisions, we showed the potential of future RWD applications to understand disease, develop individualized therapies, and improve healthcare decision making. |
format | Online Article Text |
id | pubmed-9579402 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95794022022-10-19 A novel analytical framework for risk stratification of real‐world data using machine learning: A small cell lung cancer study Marzano, Luca Darwich, Adam S. Tendler, Salomon Dan, Asaf Lewensohn, Rolf De Petris, Luigi Raghothama, Jayanth Meijer, Sebastiaan Clin Transl Sci Research In recent studies, small cell lung cancer (SCLC) treatment guidelines based on Veterans’ Administration Lung Study Group limited/extensive disease staging and resulted in broad and inseparable prognostic subgroups. Evidence suggests that the eight versions of tumor, node, and metastasis (TNM) staging can play an important role to address this issue. The aim of the present study was to improve the detection of prognostic subgroups from a real‐word data (RWD) cohort of patients and analyze their patterns using a development pipeline with thoracic oncologists and machine learning methods. The method detected subgroups of patients informing unsupervised learning (partition around medoids) including the impact of covariates on prognosis (Cox regression and random survival forest). An analysis was carried out using patients with SCLC (n = 636) with stage IIIA–IVB according to TNM classification. The analysis yielded k = 7 compacted and well‐separated clusters of patients. Performance status (Eastern Cooperative Oncology Group‐Performance Status), lactate dehydrogenase, spreading of metastasis, cancer stage, and CRP were the baselines that characterized the subgroups. The selected clustering method outperformed standard clustering techniques, which were not capable of detecting meaningful subgroups. From the analysis of cluster treatment decisions, we showed the potential of future RWD applications to understand disease, develop individualized therapies, and improve healthcare decision making. John Wiley and Sons Inc. 2022-07-29 2022-10 /pmc/articles/PMC9579402/ /pubmed/35856401 http://dx.doi.org/10.1111/cts.13371 Text en © 2022 The Authors. Clinical and Translational Science published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Marzano, Luca Darwich, Adam S. Tendler, Salomon Dan, Asaf Lewensohn, Rolf De Petris, Luigi Raghothama, Jayanth Meijer, Sebastiaan A novel analytical framework for risk stratification of real‐world data using machine learning: A small cell lung cancer study |
title | A novel analytical framework for risk stratification of real‐world data using machine learning: A small cell lung cancer study |
title_full | A novel analytical framework for risk stratification of real‐world data using machine learning: A small cell lung cancer study |
title_fullStr | A novel analytical framework for risk stratification of real‐world data using machine learning: A small cell lung cancer study |
title_full_unstemmed | A novel analytical framework for risk stratification of real‐world data using machine learning: A small cell lung cancer study |
title_short | A novel analytical framework for risk stratification of real‐world data using machine learning: A small cell lung cancer study |
title_sort | novel analytical framework for risk stratification of real‐world data using machine learning: a small cell lung cancer study |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579402/ https://www.ncbi.nlm.nih.gov/pubmed/35856401 http://dx.doi.org/10.1111/cts.13371 |
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