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An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens

In this work, we developed an integrated simulation framework for pandemic prevention and mitigation of pandemics caused by airborne pathogens, incorporating three sub-models, namely the spatial model, the mobility model, and the propagation model, to create a realistic simulation environment for th...

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Detalles Bibliográficos
Autores principales: Chondros, Christos, Nikolopoulos, Stavros D., Polenakis, Iosif
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Vienna 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579666/
https://www.ncbi.nlm.nih.gov/pubmed/36277296
http://dx.doi.org/10.1007/s13721-022-00385-z
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author Chondros, Christos
Nikolopoulos, Stavros D.
Polenakis, Iosif
author_facet Chondros, Christos
Nikolopoulos, Stavros D.
Polenakis, Iosif
author_sort Chondros, Christos
collection PubMed
description In this work, we developed an integrated simulation framework for pandemic prevention and mitigation of pandemics caused by airborne pathogens, incorporating three sub-models, namely the spatial model, the mobility model, and the propagation model, to create a realistic simulation environment for the evaluation of the effectiveness of different countermeasures on the epidemic dynamics. The spatial model converts images of real cities obtained from Google Maps into undirected weighted graphs that capture the spatial arrangement of the streets utilized next for the mobility of individuals. The mobility model implements a stochastic agent-based approach, developed to assign specific routes to individuals moving in the city, through the use of stochastic processes, utilizing the weights of the underlying graph to deploy shortest path algorithms. The propagation model implements both the epidemiological model and the physical substance of the transmission of an airborne pathogen (in our approach, we investigate the transmission parameters of SARS-CoV-2). The deployment of a set of countermeasures was investigated in reducing the spread of the pathogen, where, through a series of repetitive simulation experiments, we evaluated the effectiveness of each countermeasure in pandemic prevention.
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spelling pubmed-95796662022-10-19 An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens Chondros, Christos Nikolopoulos, Stavros D. Polenakis, Iosif Netw Model Anal Health Inform Bioinform Original Article In this work, we developed an integrated simulation framework for pandemic prevention and mitigation of pandemics caused by airborne pathogens, incorporating three sub-models, namely the spatial model, the mobility model, and the propagation model, to create a realistic simulation environment for the evaluation of the effectiveness of different countermeasures on the epidemic dynamics. The spatial model converts images of real cities obtained from Google Maps into undirected weighted graphs that capture the spatial arrangement of the streets utilized next for the mobility of individuals. The mobility model implements a stochastic agent-based approach, developed to assign specific routes to individuals moving in the city, through the use of stochastic processes, utilizing the weights of the underlying graph to deploy shortest path algorithms. The propagation model implements both the epidemiological model and the physical substance of the transmission of an airborne pathogen (in our approach, we investigate the transmission parameters of SARS-CoV-2). The deployment of a set of countermeasures was investigated in reducing the spread of the pathogen, where, through a series of repetitive simulation experiments, we evaluated the effectiveness of each countermeasure in pandemic prevention. Springer Vienna 2022-10-18 2022 /pmc/articles/PMC9579666/ /pubmed/36277296 http://dx.doi.org/10.1007/s13721-022-00385-z Text en © The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature 2022, Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Chondros, Christos
Nikolopoulos, Stavros D.
Polenakis, Iosif
An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens
title An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens
title_full An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens
title_fullStr An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens
title_full_unstemmed An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens
title_short An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens
title_sort integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579666/
https://www.ncbi.nlm.nih.gov/pubmed/36277296
http://dx.doi.org/10.1007/s13721-022-00385-z
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