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SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing

Prior to the emergence of the Omicron variant, many cities in China had been able to maintain a “Zero-COVID” policy. They were able to achieve this without blanket city-wide lockdown and through widespread testing and an extensive set of nonpharmaceutical interventions (NPIs), such as mask wearing,...

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Autores principales: Wang, Yan, Sun, Kaiyuan, Pan, Yang, Yi, Lan, Huo, Da, Wu, Yanpeng, Dong, Shuaibing, Guo, Jinxin, Dou, Xiangfeng, Wang, Wei, Wu, Shuangsheng, Bai, Xufang, Yu, Hongjie, Wang, Quanyi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9580389/
https://www.ncbi.nlm.nih.gov/pubmed/36263065
http://dx.doi.org/10.1101/2022.09.12.22279850
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author Wang, Yan
Sun, Kaiyuan
Pan, Yang
Yi, Lan
Huo, Da
Wu, Yanpeng
Dong, Shuaibing
Guo, Jinxin
Dou, Xiangfeng
Wang, Wei
Wu, Shuangsheng
Bai, Xufang
Yu, Hongjie
Wang, Quanyi
author_facet Wang, Yan
Sun, Kaiyuan
Pan, Yang
Yi, Lan
Huo, Da
Wu, Yanpeng
Dong, Shuaibing
Guo, Jinxin
Dou, Xiangfeng
Wang, Wei
Wu, Shuangsheng
Bai, Xufang
Yu, Hongjie
Wang, Quanyi
author_sort Wang, Yan
collection PubMed
description Prior to the emergence of the Omicron variant, many cities in China had been able to maintain a “Zero-COVID” policy. They were able to achieve this without blanket city-wide lockdown and through widespread testing and an extensive set of nonpharmaceutical interventions (NPIs), such as mask wearing, contact tracing, and social distancing. We wanted to examine the effectiveness of such a policy in containing SARS-CoV-2 in the early stage of the pandemic. Therefore, we developed a fully stochastic, spatially structured, agent-based model of SARS-CoV-2 ancestral strain and reconstructed the Beijing Xinfadi outbreak through computational simulations. We found that screening for symptoms and among high-risk populations served as methods to discover cryptic community transmission in the early stage of the outbreak. Effective contact tracing could greatly reduce transmission. Targeted community lockdown and temporal mobility restriction could slow down the spatial spread of the virus, with much less of the population being affected. Population-wide mass testing could further improve the speed at which the outbreak is contained. Our analysis suggests that the containment of SARS-CoV-2 ancestral strains was certainly possible. Outbreak suppression and containment at the beginning of the pandemic, before the virus had the opportunity to undergo extensive adaptive evolution with increasing fitness in the human population, could be much more cost-effective in averting the overall pandemic disease burden and socioeconomic cost.
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spelling pubmed-95803892022-10-20 SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing Wang, Yan Sun, Kaiyuan Pan, Yang Yi, Lan Huo, Da Wu, Yanpeng Dong, Shuaibing Guo, Jinxin Dou, Xiangfeng Wang, Wei Wu, Shuangsheng Bai, Xufang Yu, Hongjie Wang, Quanyi medRxiv Article Prior to the emergence of the Omicron variant, many cities in China had been able to maintain a “Zero-COVID” policy. They were able to achieve this without blanket city-wide lockdown and through widespread testing and an extensive set of nonpharmaceutical interventions (NPIs), such as mask wearing, contact tracing, and social distancing. We wanted to examine the effectiveness of such a policy in containing SARS-CoV-2 in the early stage of the pandemic. Therefore, we developed a fully stochastic, spatially structured, agent-based model of SARS-CoV-2 ancestral strain and reconstructed the Beijing Xinfadi outbreak through computational simulations. We found that screening for symptoms and among high-risk populations served as methods to discover cryptic community transmission in the early stage of the outbreak. Effective contact tracing could greatly reduce transmission. Targeted community lockdown and temporal mobility restriction could slow down the spatial spread of the virus, with much less of the population being affected. Population-wide mass testing could further improve the speed at which the outbreak is contained. Our analysis suggests that the containment of SARS-CoV-2 ancestral strains was certainly possible. Outbreak suppression and containment at the beginning of the pandemic, before the virus had the opportunity to undergo extensive adaptive evolution with increasing fitness in the human population, could be much more cost-effective in averting the overall pandemic disease burden and socioeconomic cost. Cold Spring Harbor Laboratory 2022-09-14 /pmc/articles/PMC9580389/ /pubmed/36263065 http://dx.doi.org/10.1101/2022.09.12.22279850 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Wang, Yan
Sun, Kaiyuan
Pan, Yang
Yi, Lan
Huo, Da
Wu, Yanpeng
Dong, Shuaibing
Guo, Jinxin
Dou, Xiangfeng
Wang, Wei
Wu, Shuangsheng
Bai, Xufang
Yu, Hongjie
Wang, Quanyi
SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing
title SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing
title_full SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing
title_fullStr SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing
title_full_unstemmed SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing
title_short SARS-CoV-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the Xinfadi outbreak in Beijing
title_sort sars-cov-2 containment was achievable during the early stage of the pandemic: a retrospective modelling study of the xinfadi outbreak in beijing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9580389/
https://www.ncbi.nlm.nih.gov/pubmed/36263065
http://dx.doi.org/10.1101/2022.09.12.22279850
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