CiLiQuant: Quantification of RNA Junction Reads Based on Their Circular or Linear Transcript Origin

Distinguishing circular RNA reads from reads derived from the linear host transcript is a challenging task because of sequence overlap. We developed a computational approach, CiLiQuant, that determines the relative circular and linear abundance of transcripts and gene loci using back-splice and unam...

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Detalles Bibliográficos
Autores principales: Morlion, Annelien, Hulstaert, Eva, Vromman, Marieke, Anckaert, Jasper, Everaert, Celine, Vandesompele, Jo, Mestdagh, Pieter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Bioinformatics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9580843/
https://www.ncbi.nlm.nih.gov/pubmed/36304262
http://dx.doi.org/10.3389/fbinf.2022.834034

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9580843/
https://www.ncbi.nlm.nih.gov/pubmed/36304262
http://dx.doi.org/10.3389/fbinf.2022.834034

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